Gene : Gorai.001G178100 G. raimondii v2.1
Defline:  (1 of 5) PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Genomic Order:  1781
Name:  ? Gorai.001G178100 Secondary Identifier:  ? PAC:26822356
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G178100 0.5kb upstream 0.5kb upstream 2299 true Chr01: 26757075-26759373 Gossypium raimondii
Gorai.001G178100 0.5kb upstream 0.5kb upstream 500 false Chr01: 26757075-26757574 Gossypium raimondii
Gorai.001G178100 0.5kb downstream 0.5kb downstream 2299 true Chr01: 26757575-26759873 Gossypium raimondii
Gorai.001G178100 0.5kb downstream 0.5kb downstream 500 false Chr01: 26759374-26759873 Gossypium raimondii
Gorai.001G178100 1.0kb upstream 1.0kb upstream 2799 true Chr01: 26756575-26759373 Gossypium raimondii
Gorai.001G178100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 26756575-26757574 Gossypium raimondii
Gorai.001G178100 1.0kb downstream 1.0kb downstream 2799 true Chr01: 26757575-26760373 Gossypium raimondii
Gorai.001G178100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 26759374-26760373 Gossypium raimondii
Gorai.001G178100 2.0kb upstream 2.0kb upstream 3799 true Chr01: 26755575-26759373 Gossypium raimondii
Gorai.001G178100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 26755575-26757574 Gossypium raimondii
Gorai.001G178100 2.0kb downstream 2.0kb downstream 3799 true Chr01: 26757575-26761373 Gossypium raimondii
Gorai.001G178100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 26759374-26761373 Gossypium raimondii
Gorai.001G178100 5.0kb upstream 5.0kb upstream 6799 true Chr01: 26752575-26759373 Gossypium raimondii
Gorai.001G178100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 26752575-26757574 Gossypium raimondii
Gorai.001G178100 5.0kb downstream 5.0kb downstream 6799 true Chr01: 26757575-26764373 Gossypium raimondii
Gorai.001G178100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 26759374-26764373 Gossypium raimondii
Gorai.001G178100 10.0kb upstream 10.0kb upstream 11799 true Chr01: 26747575-26759373 Gossypium raimondii
Gorai.001G178100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 26747575-26757574 Gossypium raimondii
Gorai.001G178100 10.0kb downstream 10.0kb downstream 11799 true Chr01: 26757575-26769373 Gossypium raimondii
Gorai.001G178100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 26759374-26769373 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829721 5264 Brassicales-Malvales View MSA
124351624 5266 SBM View MSA
124253434 5268 Malvidae View MSA
124071658 5270 Rosid View MSA
123753170 5271 Pentapetalae View MSA
122789282 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain