Gene : Gorai.001G178000 G. raimondii v2.1
Defline:  (1 of 3) PTHR23315:SF119 - U-BOX DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  1780
Name:  ? Gorai.001G178000 Secondary Identifier:  ? PAC:26823951
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G178000 0.5kb upstream 0.5kb upstream 5796 true Chr01: 26683399-26689194 Gossypium raimondii
Gorai.001G178000 0.5kb upstream 0.5kb upstream 500 false Chr01: 26683399-26683898 Gossypium raimondii
Gorai.001G178000 0.5kb downstream 0.5kb downstream 5796 true Chr01: 26683899-26689694 Gossypium raimondii
Gorai.001G178000 0.5kb downstream 0.5kb downstream 500 false Chr01: 26689195-26689694 Gossypium raimondii
Gorai.001G178000 1.0kb upstream 1.0kb upstream 6296 true Chr01: 26682899-26689194 Gossypium raimondii
Gorai.001G178000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 26682899-26683898 Gossypium raimondii
Gorai.001G178000 1.0kb downstream 1.0kb downstream 6296 true Chr01: 26683899-26690194 Gossypium raimondii
Gorai.001G178000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 26689195-26690194 Gossypium raimondii
Gorai.001G178000 2.0kb upstream 2.0kb upstream 7296 true Chr01: 26681899-26689194 Gossypium raimondii
Gorai.001G178000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 26681899-26683898 Gossypium raimondii
Gorai.001G178000 2.0kb downstream 2.0kb downstream 7296 true Chr01: 26683899-26691194 Gossypium raimondii
Gorai.001G178000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 26689195-26691194 Gossypium raimondii
Gorai.001G178000 5.0kb upstream 5.0kb upstream 10296 true Chr01: 26678899-26689194 Gossypium raimondii
Gorai.001G178000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 26678899-26683898 Gossypium raimondii
Gorai.001G178000 5.0kb downstream 5.0kb downstream 10296 true Chr01: 26683899-26694194 Gossypium raimondii
Gorai.001G178000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 26689195-26694194 Gossypium raimondii
Gorai.001G178000 10.0kb upstream 10.0kb upstream 15296 true Chr01: 26673899-26689194 Gossypium raimondii
Gorai.001G178000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 26673899-26683898 Gossypium raimondii
Gorai.001G178000 10.0kb downstream 10.0kb downstream 15296 true Chr01: 26683899-26699194 Gossypium raimondii
Gorai.001G178000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 26689195-26699194 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123842428 5264 Brassicales-Malvales View MSA
124323484 5266 SBM View MSA
124169491 5268 Malvidae View MSA
124067773 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain