Gene : Gorai.001G174400 G. raimondii v2.1
Defline:  (1 of 4) 2.5.1.19 - 3-phosphoshikimate 1-carboxyvinyltransferase / EPSP synthase Genomic Order:  1744
Name:  ? Gorai.001G174400 Secondary Identifier:  ? PAC:26819368
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii ARO-PWY Gossypium raimondii pathologic  
Graimondii PWY-6163 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G174400 0.5kb upstream 0.5kb upstream 4494 true Chr01: 25456508-25461001 Gossypium raimondii
Gorai.001G174400 0.5kb upstream 0.5kb upstream 500 false Chr01: 25460502-25461001 Gossypium raimondii
Gorai.001G174400 0.5kb downstream 0.5kb downstream 4494 true Chr01: 25456008-25460501 Gossypium raimondii
Gorai.001G174400 0.5kb downstream 0.5kb downstream 500 false Chr01: 25456008-25456507 Gossypium raimondii
Gorai.001G174400 1.0kb upstream 1.0kb upstream 4994 true Chr01: 25456508-25461501 Gossypium raimondii
Gorai.001G174400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 25460502-25461501 Gossypium raimondii
Gorai.001G174400 1.0kb downstream 1.0kb downstream 4994 true Chr01: 25455508-25460501 Gossypium raimondii
Gorai.001G174400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 25455508-25456507 Gossypium raimondii
Gorai.001G174400 2.0kb upstream 2.0kb upstream 5994 true Chr01: 25456508-25462501 Gossypium raimondii
Gorai.001G174400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 25460502-25462501 Gossypium raimondii
Gorai.001G174400 2.0kb downstream 2.0kb downstream 5994 true Chr01: 25454508-25460501 Gossypium raimondii
Gorai.001G174400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 25454508-25456507 Gossypium raimondii
Gorai.001G174400 5.0kb upstream 5.0kb upstream 8994 true Chr01: 25456508-25465501 Gossypium raimondii
Gorai.001G174400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 25460502-25465501 Gossypium raimondii
Gorai.001G174400 5.0kb downstream 5.0kb downstream 8994 true Chr01: 25451508-25460501 Gossypium raimondii
Gorai.001G174400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 25451508-25456507 Gossypium raimondii
Gorai.001G174400 10.0kb upstream 10.0kb upstream 13994 true Chr01: 25456508-25470501 Gossypium raimondii
Gorai.001G174400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 25460502-25470501 Gossypium raimondii
Gorai.001G174400 10.0kb downstream 10.0kb downstream 13994 true Chr01: 25446508-25460501 Gossypium raimondii
Gorai.001G174400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 25446508-25456507 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838473 5264 Brassicales-Malvales View MSA
124341976 5266 SBM View MSA
124237707 5268 Malvidae View MSA
124067523 5270 Rosid View MSA
123738347 5271 Pentapetalae View MSA
122792138 5272 Eudicot View MSA
122041964 5273 Angiosperm View MSA
121345789 5274 Embryophyte View MSA
123424749 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain