Gene : Gorai.001G181500 G. raimondii v2.1
Defline:  (1 of 3) PTHR17204:SF5 - PRE-MRNA-PROCESSING FACTOR 39 Genomic Order:  1815
Name:  ? Gorai.001G181500 Secondary Identifier:  ? PAC:26823282
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G181500 0.5kb upstream 0.5kb upstream 11508 true Chr01: 27786547-27798054 Gossypium raimondii
Gorai.001G181500 0.5kb upstream 0.5kb upstream 500 false Chr01: 27786547-27787046 Gossypium raimondii
Gorai.001G181500 0.5kb downstream 0.5kb downstream 11508 true Chr01: 27787047-27798554 Gossypium raimondii
Gorai.001G181500 0.5kb downstream 0.5kb downstream 500 false Chr01: 27798055-27798554 Gossypium raimondii
Gorai.001G181500 1.0kb upstream 1.0kb upstream 12008 true Chr01: 27786047-27798054 Gossypium raimondii
Gorai.001G181500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 27786047-27787046 Gossypium raimondii
Gorai.001G181500 1.0kb downstream 1.0kb downstream 12008 true Chr01: 27787047-27799054 Gossypium raimondii
Gorai.001G181500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 27798055-27799054 Gossypium raimondii
Gorai.001G181500 2.0kb upstream 2.0kb upstream 13008 true Chr01: 27785047-27798054 Gossypium raimondii
Gorai.001G181500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 27785047-27787046 Gossypium raimondii
Gorai.001G181500 2.0kb downstream 2.0kb downstream 13008 true Chr01: 27787047-27800054 Gossypium raimondii
Gorai.001G181500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 27798055-27800054 Gossypium raimondii
Gorai.001G181500 5.0kb upstream 5.0kb upstream 16008 true Chr01: 27782047-27798054 Gossypium raimondii
Gorai.001G181500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 27782047-27787046 Gossypium raimondii
Gorai.001G181500 5.0kb downstream 5.0kb downstream 16008 true Chr01: 27787047-27803054 Gossypium raimondii
Gorai.001G181500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 27798055-27803054 Gossypium raimondii
Gorai.001G181500 10.0kb upstream 10.0kb upstream 21008 true Chr01: 27777047-27798054 Gossypium raimondii
Gorai.001G181500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 27777047-27787046 Gossypium raimondii
Gorai.001G181500 10.0kb downstream 10.0kb downstream 21008 true Chr01: 27787047-27808054 Gossypium raimondii
Gorai.001G181500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 27798055-27808054 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837374 5264 Brassicales-Malvales View MSA
124338956 5266 SBM View MSA
124238962 5268 Malvidae View MSA
124068897 5270 Rosid View MSA
123746236 5271 Pentapetalae View MSA
122794509 5272 Eudicot View MSA
122048891 5273 Angiosperm View MSA
121349849 5274 Embryophyte View MSA
123426942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain