Gene : Gorai.001G193800 G. raimondii v2.1
Defline:  (1 of 6) PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED Genomic Order:  1938
Name:  ? Gorai.001G193800 Secondary Identifier:  ? PAC:26824152
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1081 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G193800 0.5kb upstream 0.5kb upstream 2153 true Chr01: 32832518-32834670 Gossypium raimondii
Gorai.001G193800 0.5kb upstream 0.5kb upstream 500 false Chr01: 32832518-32833017 Gossypium raimondii
Gorai.001G193800 0.5kb downstream 0.5kb downstream 2153 true Chr01: 32833018-32835170 Gossypium raimondii
Gorai.001G193800 0.5kb downstream 0.5kb downstream 500 false Chr01: 32834671-32835170 Gossypium raimondii
Gorai.001G193800 1.0kb upstream 1.0kb upstream 2653 true Chr01: 32832018-32834670 Gossypium raimondii
Gorai.001G193800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 32832018-32833017 Gossypium raimondii
Gorai.001G193800 1.0kb downstream 1.0kb downstream 2653 true Chr01: 32833018-32835670 Gossypium raimondii
Gorai.001G193800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 32834671-32835670 Gossypium raimondii
Gorai.001G193800 2.0kb upstream 2.0kb upstream 3653 true Chr01: 32831018-32834670 Gossypium raimondii
Gorai.001G193800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 32831018-32833017 Gossypium raimondii
Gorai.001G193800 2.0kb downstream 2.0kb downstream 3653 true Chr01: 32833018-32836670 Gossypium raimondii
Gorai.001G193800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 32834671-32836670 Gossypium raimondii
Gorai.001G193800 5.0kb upstream 5.0kb upstream 6653 true Chr01: 32828018-32834670 Gossypium raimondii
Gorai.001G193800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 32828018-32833017 Gossypium raimondii
Gorai.001G193800 5.0kb downstream 5.0kb downstream 6653 true Chr01: 32833018-32839670 Gossypium raimondii
Gorai.001G193800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 32834671-32839670 Gossypium raimondii
Gorai.001G193800 10.0kb upstream 10.0kb upstream 11653 true Chr01: 32823018-32834670 Gossypium raimondii
Gorai.001G193800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 32823018-32833017 Gossypium raimondii
Gorai.001G193800 10.0kb downstream 10.0kb downstream 11653 true Chr01: 32833018-32844670 Gossypium raimondii
Gorai.001G193800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 32834671-32844670 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841196 5264 Brassicales-Malvales View MSA
124349703 5266 SBM View MSA
124252748 5268 Malvidae View MSA
124074380 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain