Gene : Gorai.001G189500 G. raimondii v2.1
Defline:  (1 of 2) PTHR11062//PTHR11062:SF104 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED Genomic Order:  1895
Name:  ? Gorai.001G189500 Secondary Identifier:  ? PAC:26825054
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5980 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G189500 0.5kb upstream 0.5kb upstream 2738 true Chr01: 31040792-31043529 Gossypium raimondii
Gorai.001G189500 0.5kb upstream 0.5kb upstream 500 false Chr01: 31043030-31043529 Gossypium raimondii
Gorai.001G189500 0.5kb downstream 0.5kb downstream 2738 true Chr01: 31040292-31043029 Gossypium raimondii
Gorai.001G189500 0.5kb downstream 0.5kb downstream 500 false Chr01: 31040292-31040791 Gossypium raimondii
Gorai.001G189500 1.0kb upstream 1.0kb upstream 3238 true Chr01: 31040792-31044029 Gossypium raimondii
Gorai.001G189500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 31043030-31044029 Gossypium raimondii
Gorai.001G189500 1.0kb downstream 1.0kb downstream 3238 true Chr01: 31039792-31043029 Gossypium raimondii
Gorai.001G189500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 31039792-31040791 Gossypium raimondii
Gorai.001G189500 2.0kb upstream 2.0kb upstream 4238 true Chr01: 31040792-31045029 Gossypium raimondii
Gorai.001G189500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 31043030-31045029 Gossypium raimondii
Gorai.001G189500 2.0kb downstream 2.0kb downstream 4238 true Chr01: 31038792-31043029 Gossypium raimondii
Gorai.001G189500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 31038792-31040791 Gossypium raimondii
Gorai.001G189500 5.0kb upstream 5.0kb upstream 7238 true Chr01: 31040792-31048029 Gossypium raimondii
Gorai.001G189500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 31043030-31048029 Gossypium raimondii
Gorai.001G189500 5.0kb downstream 5.0kb downstream 7238 true Chr01: 31035792-31043029 Gossypium raimondii
Gorai.001G189500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 31035792-31040791 Gossypium raimondii
Gorai.001G189500 10.0kb upstream 10.0kb upstream 12238 true Chr01: 31040792-31053029 Gossypium raimondii
Gorai.001G189500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 31043030-31053029 Gossypium raimondii
Gorai.001G189500 10.0kb downstream 10.0kb downstream 12238 true Chr01: 31030792-31043029 Gossypium raimondii
Gorai.001G189500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 31030792-31040791 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825104 5264 Brassicales-Malvales View MSA
124347112 5266 SBM View MSA
124246530 5268 Malvidae View MSA
124070625 5270 Rosid View MSA
123746709 5271 Pentapetalae View MSA
122795318 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain