Gene : Gorai.001G206400 G. raimondii v2.1
Defline:  (1 of 4) PTHR23321:SF31 - RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN-RELATED Genomic Order:  2064
Name:  ? Gorai.001G206400 Secondary Identifier:  ? PAC:26822203
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii CALVIN-PWY Gossypium raimondii pathologic  
Graimondii PHOTOALL-PWY Gossypium raimondii pathologic  
Graimondii PWY-5723 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G206400 0.5kb upstream 0.5kb upstream 3418 true Chr01: 40451764-40455181 Gossypium raimondii
Gorai.001G206400 0.5kb upstream 0.5kb upstream 500 false Chr01: 40454682-40455181 Gossypium raimondii
Gorai.001G206400 0.5kb downstream 0.5kb downstream 3418 true Chr01: 40451264-40454681 Gossypium raimondii
Gorai.001G206400 0.5kb downstream 0.5kb downstream 500 false Chr01: 40451264-40451763 Gossypium raimondii
Gorai.001G206400 1.0kb upstream 1.0kb upstream 3918 true Chr01: 40451764-40455681 Gossypium raimondii
Gorai.001G206400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40454682-40455681 Gossypium raimondii
Gorai.001G206400 1.0kb downstream 1.0kb downstream 3918 true Chr01: 40450764-40454681 Gossypium raimondii
Gorai.001G206400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40450764-40451763 Gossypium raimondii
Gorai.001G206400 2.0kb upstream 2.0kb upstream 4918 true Chr01: 40451764-40456681 Gossypium raimondii
Gorai.001G206400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40454682-40456681 Gossypium raimondii
Gorai.001G206400 2.0kb downstream 2.0kb downstream 4918 true Chr01: 40449764-40454681 Gossypium raimondii
Gorai.001G206400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40449764-40451763 Gossypium raimondii
Gorai.001G206400 5.0kb upstream 5.0kb upstream 7918 true Chr01: 40451764-40459681 Gossypium raimondii
Gorai.001G206400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40454682-40459681 Gossypium raimondii
Gorai.001G206400 5.0kb downstream 5.0kb downstream 7918 true Chr01: 40446764-40454681 Gossypium raimondii
Gorai.001G206400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40446764-40451763 Gossypium raimondii
Gorai.001G206400 10.0kb upstream 10.0kb upstream 12918 true Chr01: 40451764-40464681 Gossypium raimondii
Gorai.001G206400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40454682-40464681 Gossypium raimondii
Gorai.001G206400 10.0kb downstream 10.0kb downstream 12918 true Chr01: 40441764-40454681 Gossypium raimondii
Gorai.001G206400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40441764-40451763 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123804275 5264 Brassicales-Malvales Singleton cluster - no MSA
124301319 5266 SBM Singleton cluster - no MSA
124152327 5268 Malvidae Singleton cluster - no MSA
123877595 5270 Rosid Singleton cluster - no MSA
123751247 5271 Pentapetalae View MSA
122773961 5272 Eudicot View MSA
122051023 5273 Angiosperm View MSA
121312251 5274 Embryophyte View MSA
123428195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain