Gene : Gorai.001G229000 G. raimondii v2.1
Defline:  (1 of 6) 6.1.1.22 - Asparagine--tRNA ligase / Asparaginyl-tRNA synthetase Genomic Order:  2290
Name:  ? Gorai.001G229000 Secondary Identifier:  ? PAC:26821651
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRNA-CHARGING-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G229000 0.5kb upstream 0.5kb upstream 3662 true Chr01: 46536837-46540498 Gossypium raimondii
Gorai.001G229000 0.5kb upstream 0.5kb upstream 500 false Chr01: 46536837-46537336 Gossypium raimondii
Gorai.001G229000 0.5kb downstream 0.5kb downstream 3662 true Chr01: 46537337-46540998 Gossypium raimondii
Gorai.001G229000 0.5kb downstream 0.5kb downstream 500 false Chr01: 46540499-46540998 Gossypium raimondii
Gorai.001G229000 1.0kb upstream 1.0kb upstream 4162 true Chr01: 46536337-46540498 Gossypium raimondii
Gorai.001G229000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 46536337-46537336 Gossypium raimondii
Gorai.001G229000 1.0kb downstream 1.0kb downstream 4162 true Chr01: 46537337-46541498 Gossypium raimondii
Gorai.001G229000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 46540499-46541498 Gossypium raimondii
Gorai.001G229000 2.0kb upstream 2.0kb upstream 5162 true Chr01: 46535337-46540498 Gossypium raimondii
Gorai.001G229000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 46535337-46537336 Gossypium raimondii
Gorai.001G229000 2.0kb downstream 2.0kb downstream 5162 true Chr01: 46537337-46542498 Gossypium raimondii
Gorai.001G229000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 46540499-46542498 Gossypium raimondii
Gorai.001G229000 5.0kb upstream 5.0kb upstream 8162 true Chr01: 46532337-46540498 Gossypium raimondii
Gorai.001G229000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 46532337-46537336 Gossypium raimondii
Gorai.001G229000 5.0kb downstream 5.0kb downstream 8162 true Chr01: 46537337-46545498 Gossypium raimondii
Gorai.001G229000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 46540499-46545498 Gossypium raimondii
Gorai.001G229000 10.0kb upstream 10.0kb upstream 13162 true Chr01: 46527337-46540498 Gossypium raimondii
Gorai.001G229000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 46527337-46537336 Gossypium raimondii
Gorai.001G229000 10.0kb downstream 10.0kb downstream 13162 true Chr01: 46537337-46550498 Gossypium raimondii
Gorai.001G229000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 46540499-46550498 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830836 5264 Brassicales-Malvales View MSA
124344086 5266 SBM View MSA
124250826 5268 Malvidae View MSA
124074798 5270 Rosid View MSA
123738885 5271 Pentapetalae View MSA
122790023 5272 Eudicot View MSA
122045893 5273 Angiosperm View MSA
121347200 5274 Embryophyte View MSA
123425101 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain