Gene : Gorai.001G227500 G. raimondii v2.1
Defline:  (1 of 3) PF00060//PF01094 - Ligand-gated ion channel (Lig_chan) // Receptor family ligand binding region (ANF_receptor) Genomic Order:  2275
Name:  ? Gorai.001G227500 Secondary Identifier:  ? PAC:26825044
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G227500 0.5kb upstream 0.5kb upstream 3529 true Chr01: 46361353-46364881 Gossypium raimondii
Gorai.001G227500 0.5kb upstream 0.5kb upstream 500 false Chr01: 46361353-46361852 Gossypium raimondii
Gorai.001G227500 0.5kb downstream 0.5kb downstream 3529 true Chr01: 46361853-46365381 Gossypium raimondii
Gorai.001G227500 0.5kb downstream 0.5kb downstream 500 false Chr01: 46364882-46365381 Gossypium raimondii
Gorai.001G227500 1.0kb upstream 1.0kb upstream 4029 true Chr01: 46360853-46364881 Gossypium raimondii
Gorai.001G227500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 46360853-46361852 Gossypium raimondii
Gorai.001G227500 1.0kb downstream 1.0kb downstream 4029 true Chr01: 46361853-46365881 Gossypium raimondii
Gorai.001G227500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 46364882-46365881 Gossypium raimondii
Gorai.001G227500 2.0kb upstream 2.0kb upstream 5029 true Chr01: 46359853-46364881 Gossypium raimondii
Gorai.001G227500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 46359853-46361852 Gossypium raimondii
Gorai.001G227500 2.0kb downstream 2.0kb downstream 5029 true Chr01: 46361853-46366881 Gossypium raimondii
Gorai.001G227500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 46364882-46366881 Gossypium raimondii
Gorai.001G227500 5.0kb upstream 5.0kb upstream 8029 true Chr01: 46356853-46364881 Gossypium raimondii
Gorai.001G227500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 46356853-46361852 Gossypium raimondii
Gorai.001G227500 5.0kb downstream 5.0kb downstream 8029 true Chr01: 46361853-46369881 Gossypium raimondii
Gorai.001G227500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 46364882-46369881 Gossypium raimondii
Gorai.001G227500 10.0kb upstream 10.0kb upstream 13029 true Chr01: 46351853-46364881 Gossypium raimondii
Gorai.001G227500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 46351853-46361852 Gossypium raimondii
Gorai.001G227500 10.0kb downstream 10.0kb downstream 13029 true Chr01: 46361853-46374881 Gossypium raimondii
Gorai.001G227500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 46364882-46374881 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827743 5264 Brassicales-Malvales View MSA
124347411 5266 SBM View MSA
124255377 5268 Malvidae View MSA
124039054 5270 Rosid View MSA
123753015 5271 Pentapetalae View MSA
122797408 5272 Eudicot View MSA
122051662 5273 Angiosperm View MSA
121351346 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain