Gene : Gorai.001G236200 G. raimondii v2.1
Defline:  (1 of 4) PTHR23023:SF83 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA5-RELATED Genomic Order:  2362
Name:  ? Gorai.001G236200 Secondary Identifier:  ? PAC:26821530
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWYDQC-4 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G236200 0.5kb upstream 0.5kb upstream 2334 true Chr01: 47386343-47388676 Gossypium raimondii
Gorai.001G236200 0.5kb upstream 0.5kb upstream 500 false Chr01: 47388177-47388676 Gossypium raimondii
Gorai.001G236200 0.5kb downstream 0.5kb downstream 2334 true Chr01: 47385843-47388176 Gossypium raimondii
Gorai.001G236200 0.5kb downstream 0.5kb downstream 500 false Chr01: 47385843-47386342 Gossypium raimondii
Gorai.001G236200 1.0kb upstream 1.0kb upstream 2834 true Chr01: 47386343-47389176 Gossypium raimondii
Gorai.001G236200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47388177-47389176 Gossypium raimondii
Gorai.001G236200 1.0kb downstream 1.0kb downstream 2834 true Chr01: 47385343-47388176 Gossypium raimondii
Gorai.001G236200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47385343-47386342 Gossypium raimondii
Gorai.001G236200 2.0kb upstream 2.0kb upstream 3834 true Chr01: 47386343-47390176 Gossypium raimondii
Gorai.001G236200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47388177-47390176 Gossypium raimondii
Gorai.001G236200 2.0kb downstream 2.0kb downstream 3834 true Chr01: 47384343-47388176 Gossypium raimondii
Gorai.001G236200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47384343-47386342 Gossypium raimondii
Gorai.001G236200 5.0kb upstream 5.0kb upstream 6834 true Chr01: 47386343-47393176 Gossypium raimondii
Gorai.001G236200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47388177-47393176 Gossypium raimondii
Gorai.001G236200 5.0kb downstream 5.0kb downstream 6834 true Chr01: 47381343-47388176 Gossypium raimondii
Gorai.001G236200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47381343-47386342 Gossypium raimondii
Gorai.001G236200 10.0kb upstream 10.0kb upstream 11834 true Chr01: 47386343-47398176 Gossypium raimondii
Gorai.001G236200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47388177-47398176 Gossypium raimondii
Gorai.001G236200 10.0kb downstream 10.0kb downstream 11834 true Chr01: 47376343-47388176 Gossypium raimondii
Gorai.001G236200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47376343-47386342 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123804178 5264 Brassicales-Malvales Singleton cluster - no MSA
124301225 5266 SBM Singleton cluster - no MSA
124152248 5268 Malvidae Singleton cluster - no MSA
123877526 5270 Rosid Singleton cluster - no MSA
123461038 5271 Pentapetalae Singleton cluster - no MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain