Gene : Gorai.002G028700 G. raimondii v2.1
Defline:  (1 of 4) PTHR14155:SF117 - E3 UBIQUITIN-PROTEIN LIGASE ATL41-RELATED Genomic Order:  287
Name:  ? Gorai.002G028700 Secondary Identifier:  ? PAC:26793692
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G028700 0.5kb upstream 0.5kb upstream 1942 true Chr02: 2128136-2130077 Gossypium raimondii
Gorai.002G028700 0.5kb upstream 0.5kb upstream 500 false Chr02: 2128136-2128635 Gossypium raimondii
Gorai.002G028700 0.5kb downstream 0.5kb downstream 1942 true Chr02: 2128636-2130577 Gossypium raimondii
Gorai.002G028700 0.5kb downstream 0.5kb downstream 500 false Chr02: 2130078-2130577 Gossypium raimondii
Gorai.002G028700 1.0kb upstream 1.0kb upstream 2442 true Chr02: 2127636-2130077 Gossypium raimondii
Gorai.002G028700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2127636-2128635 Gossypium raimondii
Gorai.002G028700 1.0kb downstream 1.0kb downstream 2442 true Chr02: 2128636-2131077 Gossypium raimondii
Gorai.002G028700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2130078-2131077 Gossypium raimondii
Gorai.002G028700 2.0kb upstream 2.0kb upstream 3442 true Chr02: 2126636-2130077 Gossypium raimondii
Gorai.002G028700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2126636-2128635 Gossypium raimondii
Gorai.002G028700 2.0kb downstream 2.0kb downstream 3442 true Chr02: 2128636-2132077 Gossypium raimondii
Gorai.002G028700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2130078-2132077 Gossypium raimondii
Gorai.002G028700 5.0kb upstream 5.0kb upstream 6442 true Chr02: 2123636-2130077 Gossypium raimondii
Gorai.002G028700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2123636-2128635 Gossypium raimondii
Gorai.002G028700 5.0kb downstream 5.0kb downstream 6442 true Chr02: 2128636-2135077 Gossypium raimondii
Gorai.002G028700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2130078-2135077 Gossypium raimondii
Gorai.002G028700 10.0kb upstream 10.0kb upstream 11442 true Chr02: 2118636-2130077 Gossypium raimondii
Gorai.002G028700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2118636-2128635 Gossypium raimondii
Gorai.002G028700 10.0kb downstream 10.0kb downstream 11442 true Chr02: 2128636-2140077 Gossypium raimondii
Gorai.002G028700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2130078-2140077 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123805000 5264 Brassicales-Malvales Singleton cluster - no MSA
124301999 5266 SBM Singleton cluster - no MSA
124253774 5268 Malvidae View MSA
124069328 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain