Gene : Gorai.002G045400 G. raimondii v2.1
Defline:  (1 of 1) PTHR11766 - TYROSYL-TRNA SYNTHETASE Genomic Order:  454
Name:  ? Gorai.002G045400 Secondary Identifier:  ? PAC:26794780
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRNA-CHARGING-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G045400 0.5kb upstream 0.5kb upstream 2530 true Chr02: 3786536-3789065 Gossypium raimondii
Gorai.002G045400 0.5kb upstream 0.5kb upstream 500 false Chr02: 3786536-3787035 Gossypium raimondii
Gorai.002G045400 0.5kb downstream 0.5kb downstream 2530 true Chr02: 3787036-3789565 Gossypium raimondii
Gorai.002G045400 0.5kb downstream 0.5kb downstream 500 false Chr02: 3789066-3789565 Gossypium raimondii
Gorai.002G045400 1.0kb upstream 1.0kb upstream 3030 true Chr02: 3786036-3789065 Gossypium raimondii
Gorai.002G045400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3786036-3787035 Gossypium raimondii
Gorai.002G045400 1.0kb downstream 1.0kb downstream 3030 true Chr02: 3787036-3790065 Gossypium raimondii
Gorai.002G045400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3789066-3790065 Gossypium raimondii
Gorai.002G045400 2.0kb upstream 2.0kb upstream 4030 true Chr02: 3785036-3789065 Gossypium raimondii
Gorai.002G045400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3785036-3787035 Gossypium raimondii
Gorai.002G045400 2.0kb downstream 2.0kb downstream 4030 true Chr02: 3787036-3791065 Gossypium raimondii
Gorai.002G045400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3789066-3791065 Gossypium raimondii
Gorai.002G045400 5.0kb upstream 5.0kb upstream 7030 true Chr02: 3782036-3789065 Gossypium raimondii
Gorai.002G045400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3782036-3787035 Gossypium raimondii
Gorai.002G045400 5.0kb downstream 5.0kb downstream 7030 true Chr02: 3787036-3794065 Gossypium raimondii
Gorai.002G045400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3789066-3794065 Gossypium raimondii
Gorai.002G045400 10.0kb upstream 10.0kb upstream 12030 true Chr02: 3777036-3789065 Gossypium raimondii
Gorai.002G045400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3777036-3787035 Gossypium raimondii
Gorai.002G045400 10.0kb downstream 10.0kb downstream 12030 true Chr02: 3787036-3799065 Gossypium raimondii
Gorai.002G045400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3789066-3799065 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830850 5264 Brassicales-Malvales View MSA
124350440 5266 SBM View MSA
124241597 5268 Malvidae View MSA
124066531 5270 Rosid View MSA
123740976 5271 Pentapetalae View MSA
122788187 5272 Eudicot View MSA
122042111 5273 Angiosperm View MSA
121344516 5274 Embryophyte View MSA
123424944 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain