Gene : Gorai.002G089600 G. raimondii v2.1
Defline:  (1 of 2) PTHR12001//PTHR12001:SF57 - GERANYLGERANYL PYROPHOSPHATE SYNTHASE Genomic Order:  896
Name:  ? Gorai.002G089600 Secondary Identifier:  ? PAC:26795437
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5120 Gossypium raimondii pathologic  
Graimondii PWY-5910 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G089600 0.5kb upstream 0.5kb upstream 1391 true Chr02: 11306126-11307516 Gossypium raimondii
Gorai.002G089600 0.5kb upstream 0.5kb upstream 500 false Chr02: 11307017-11307516 Gossypium raimondii
Gorai.002G089600 0.5kb downstream 0.5kb downstream 1391 true Chr02: 11305626-11307016 Gossypium raimondii
Gorai.002G089600 0.5kb downstream 0.5kb downstream 500 false Chr02: 11305626-11306125 Gossypium raimondii
Gorai.002G089600 1.0kb upstream 1.0kb upstream 1891 true Chr02: 11306126-11308016 Gossypium raimondii
Gorai.002G089600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 11307017-11308016 Gossypium raimondii
Gorai.002G089600 1.0kb downstream 1.0kb downstream 1891 true Chr02: 11305126-11307016 Gossypium raimondii
Gorai.002G089600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 11305126-11306125 Gossypium raimondii
Gorai.002G089600 2.0kb upstream 2.0kb upstream 2891 true Chr02: 11306126-11309016 Gossypium raimondii
Gorai.002G089600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 11307017-11309016 Gossypium raimondii
Gorai.002G089600 2.0kb downstream 2.0kb downstream 2891 true Chr02: 11304126-11307016 Gossypium raimondii
Gorai.002G089600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 11304126-11306125 Gossypium raimondii
Gorai.002G089600 5.0kb upstream 5.0kb upstream 5891 true Chr02: 11306126-11312016 Gossypium raimondii
Gorai.002G089600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 11307017-11312016 Gossypium raimondii
Gorai.002G089600 5.0kb downstream 5.0kb downstream 5891 true Chr02: 11301126-11307016 Gossypium raimondii
Gorai.002G089600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 11301126-11306125 Gossypium raimondii
Gorai.002G089600 10.0kb upstream 10.0kb upstream 10891 true Chr02: 11306126-11317016 Gossypium raimondii
Gorai.002G089600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 11307017-11317016 Gossypium raimondii
Gorai.002G089600 10.0kb downstream 10.0kb downstream 10891 true Chr02: 11296126-11307016 Gossypium raimondii
Gorai.002G089600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 11296126-11306125 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792206 5273 Angiosperm View MSA
123825062 5264 Brassicales-Malvales View MSA
124347989 5266 SBM View MSA
124254265 5268 Malvidae View MSA
124070417 5270 Rosid View MSA
123742390 5271 Pentapetalae View MSA
122796955 5272 Eudicot View MSA
121063452 5274 Embryophyte View MSA
123103200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain