Gene : Gorai.002G101400 G. raimondii v2.1
Defline:  (1 of 9) PTHR13301:SF60 - CELLULOSE SYNTHASE-LIKE PROTEIN E1 Genomic Order:  1014
Name:  ? Gorai.002G101400 Secondary Identifier:  ? PAC:26795609
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1001 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G101400 0.5kb upstream 0.5kb upstream 3681 true Chr02: 12871251-12874931 Gossypium raimondii
Gorai.002G101400 0.5kb upstream 0.5kb upstream 500 false Chr02: 12874432-12874931 Gossypium raimondii
Gorai.002G101400 0.5kb downstream 0.5kb downstream 3681 true Chr02: 12870751-12874431 Gossypium raimondii
Gorai.002G101400 0.5kb downstream 0.5kb downstream 500 false Chr02: 12870751-12871250 Gossypium raimondii
Gorai.002G101400 1.0kb upstream 1.0kb upstream 4181 true Chr02: 12871251-12875431 Gossypium raimondii
Gorai.002G101400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12874432-12875431 Gossypium raimondii
Gorai.002G101400 1.0kb downstream 1.0kb downstream 4181 true Chr02: 12870251-12874431 Gossypium raimondii
Gorai.002G101400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12870251-12871250 Gossypium raimondii
Gorai.002G101400 2.0kb upstream 2.0kb upstream 5181 true Chr02: 12871251-12876431 Gossypium raimondii
Gorai.002G101400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12874432-12876431 Gossypium raimondii
Gorai.002G101400 2.0kb downstream 2.0kb downstream 5181 true Chr02: 12869251-12874431 Gossypium raimondii
Gorai.002G101400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12869251-12871250 Gossypium raimondii
Gorai.002G101400 5.0kb upstream 5.0kb upstream 8181 true Chr02: 12871251-12879431 Gossypium raimondii
Gorai.002G101400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12874432-12879431 Gossypium raimondii
Gorai.002G101400 5.0kb downstream 5.0kb downstream 8181 true Chr02: 12866251-12874431 Gossypium raimondii
Gorai.002G101400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12866251-12871250 Gossypium raimondii
Gorai.002G101400 10.0kb upstream 10.0kb upstream 13181 true Chr02: 12871251-12884431 Gossypium raimondii
Gorai.002G101400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12874432-12884431 Gossypium raimondii
Gorai.002G101400 10.0kb downstream 10.0kb downstream 13181 true Chr02: 12861251-12874431 Gossypium raimondii
Gorai.002G101400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12861251-12871250 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830596 5264 Brassicales-Malvales View MSA
124339465 5266 SBM View MSA
124237130 5268 Malvidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain