Gene : Gorai.002G098400 G. raimondii v2.1
Defline:  (1 of 2) PTHR23416:SF56 - SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC-RELATED Genomic Order:  984
Name:  ? Gorai.002G098400 Secondary Identifier:  ? PAC:26796268
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii CYSTSYN-PWY Gossypium raimondii pathologic  
Graimondii PWY-6936 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G098400 0.5kb upstream 0.5kb upstream 2198 true Chr02: 12523164-12525361 Gossypium raimondii
Gorai.002G098400 0.5kb upstream 0.5kb upstream 500 false Chr02: 12524862-12525361 Gossypium raimondii
Gorai.002G098400 0.5kb downstream 0.5kb downstream 2198 true Chr02: 12522664-12524861 Gossypium raimondii
Gorai.002G098400 0.5kb downstream 0.5kb downstream 500 false Chr02: 12522664-12523163 Gossypium raimondii
Gorai.002G098400 1.0kb upstream 1.0kb upstream 2698 true Chr02: 12523164-12525861 Gossypium raimondii
Gorai.002G098400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12524862-12525861 Gossypium raimondii
Gorai.002G098400 1.0kb downstream 1.0kb downstream 2698 true Chr02: 12522164-12524861 Gossypium raimondii
Gorai.002G098400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12522164-12523163 Gossypium raimondii
Gorai.002G098400 2.0kb upstream 2.0kb upstream 3698 true Chr02: 12523164-12526861 Gossypium raimondii
Gorai.002G098400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12524862-12526861 Gossypium raimondii
Gorai.002G098400 2.0kb downstream 2.0kb downstream 3698 true Chr02: 12521164-12524861 Gossypium raimondii
Gorai.002G098400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12521164-12523163 Gossypium raimondii
Gorai.002G098400 5.0kb upstream 5.0kb upstream 6698 true Chr02: 12523164-12529861 Gossypium raimondii
Gorai.002G098400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12524862-12529861 Gossypium raimondii
Gorai.002G098400 5.0kb downstream 5.0kb downstream 6698 true Chr02: 12518164-12524861 Gossypium raimondii
Gorai.002G098400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12518164-12523163 Gossypium raimondii
Gorai.002G098400 10.0kb upstream 10.0kb upstream 11698 true Chr02: 12523164-12534861 Gossypium raimondii
Gorai.002G098400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12524862-12534861 Gossypium raimondii
Gorai.002G098400 10.0kb downstream 10.0kb downstream 11698 true Chr02: 12513164-12524861 Gossypium raimondii
Gorai.002G098400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12513164-12523163 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835018 5264 Brassicales-Malvales View MSA
124338786 5266 SBM View MSA
124238162 5268 Malvidae View MSA
124069334 5270 Rosid View MSA
123751427 5271 Pentapetalae View MSA
122788280 5272 Eudicot View MSA
122045055 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain