Gene : Gorai.002G107300 G. raimondii v2.1
Defline:  (1 of 1) PTHR11406:SF8 - PHOSPHOGLYCERATE KINASE 1, CHLOROPLASTIC-RELATED Genomic Order:  1073
Name:  ? Gorai.002G107300 Secondary Identifier:  ? PAC:26796915
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii ANAEROFRUCAT-PWY Gossypium raimondii pathologic  
Graimondii ANAGLYCOLYSIS-PWY Gossypium raimondii pathologic  
Graimondii CALVIN-PWY Gossypium raimondii pathologic  
Graimondii GLUCONEO-PWY Gossypium raimondii pathologic  
Graimondii PHOTOALL-PWY Gossypium raimondii pathologic  
Graimondii PWY-1042 Gossypium raimondii pathologic  
Graimondii PWY-5464 Gossypium raimondii pathologic  
Graimondii PWY66-399 Gossypium raimondii pathologic  
Graimondii SUCSYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G107300 0.5kb upstream 0.5kb upstream 4217 true Chr02: 14488995-14493211 Gossypium raimondii
Gorai.002G107300 0.5kb upstream 0.5kb upstream 500 false Chr02: 14492712-14493211 Gossypium raimondii
Gorai.002G107300 0.5kb downstream 0.5kb downstream 4217 true Chr02: 14488495-14492711 Gossypium raimondii
Gorai.002G107300 0.5kb downstream 0.5kb downstream 500 false Chr02: 14488495-14488994 Gossypium raimondii
Gorai.002G107300 1.0kb upstream 1.0kb upstream 4717 true Chr02: 14488995-14493711 Gossypium raimondii
Gorai.002G107300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14492712-14493711 Gossypium raimondii
Gorai.002G107300 1.0kb downstream 1.0kb downstream 4717 true Chr02: 14487995-14492711 Gossypium raimondii
Gorai.002G107300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14487995-14488994 Gossypium raimondii
Gorai.002G107300 2.0kb upstream 2.0kb upstream 5717 true Chr02: 14488995-14494711 Gossypium raimondii
Gorai.002G107300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14492712-14494711 Gossypium raimondii
Gorai.002G107300 2.0kb downstream 2.0kb downstream 5717 true Chr02: 14486995-14492711 Gossypium raimondii
Gorai.002G107300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14486995-14488994 Gossypium raimondii
Gorai.002G107300 5.0kb upstream 5.0kb upstream 8717 true Chr02: 14488995-14497711 Gossypium raimondii
Gorai.002G107300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14492712-14497711 Gossypium raimondii
Gorai.002G107300 5.0kb downstream 5.0kb downstream 8717 true Chr02: 14483995-14492711 Gossypium raimondii
Gorai.002G107300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14483995-14488994 Gossypium raimondii
Gorai.002G107300 10.0kb upstream 10.0kb upstream 13717 true Chr02: 14488995-14502711 Gossypium raimondii
Gorai.002G107300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14492712-14502711 Gossypium raimondii
Gorai.002G107300 10.0kb downstream 10.0kb downstream 13717 true Chr02: 14478995-14492711 Gossypium raimondii
Gorai.002G107300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14478995-14488994 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832866 5264 Brassicales-Malvales View MSA
124347781 5266 SBM View MSA
124238345 5268 Malvidae View MSA
124066937 5270 Rosid View MSA
123738509 5271 Pentapetalae View MSA
122793227 5272 Eudicot View MSA
122042825 5273 Angiosperm View MSA
121348563 5274 Embryophyte View MSA
123423936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain