Gene : Gorai.002G110500 G. raimondii v2.1
Defline:  (1 of 1) PTHR11699:SF49 - SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL Genomic Order:  1105
Name:  ? Gorai.002G110500 Secondary Identifier:  ? PAC:26791850
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii GLUDEG-I-PWY Gossypium raimondii pathologic  
Graimondii PWY-4321 Gossypium raimondii pathologic  
Graimondii PWY-6473 Gossypium raimondii pathologic  
Graimondii PWY-6535 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G110500 0.5kb upstream 0.5kb upstream 22526 true Chr02: 15221180-15243705 Gossypium raimondii
Gorai.002G110500 0.5kb upstream 0.5kb upstream 500 false Chr02: 15243206-15243705 Gossypium raimondii
Gorai.002G110500 0.5kb downstream 0.5kb downstream 22526 true Chr02: 15220680-15243205 Gossypium raimondii
Gorai.002G110500 0.5kb downstream 0.5kb downstream 500 false Chr02: 15220680-15221179 Gossypium raimondii
Gorai.002G110500 1.0kb upstream 1.0kb upstream 23026 true Chr02: 15221180-15244205 Gossypium raimondii
Gorai.002G110500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15243206-15244205 Gossypium raimondii
Gorai.002G110500 1.0kb downstream 1.0kb downstream 23026 true Chr02: 15220180-15243205 Gossypium raimondii
Gorai.002G110500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15220180-15221179 Gossypium raimondii
Gorai.002G110500 2.0kb upstream 2.0kb upstream 24026 true Chr02: 15221180-15245205 Gossypium raimondii
Gorai.002G110500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15243206-15245205 Gossypium raimondii
Gorai.002G110500 2.0kb downstream 2.0kb downstream 24026 true Chr02: 15219180-15243205 Gossypium raimondii
Gorai.002G110500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15219180-15221179 Gossypium raimondii
Gorai.002G110500 5.0kb upstream 5.0kb upstream 27026 true Chr02: 15221180-15248205 Gossypium raimondii
Gorai.002G110500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15243206-15248205 Gossypium raimondii
Gorai.002G110500 5.0kb downstream 5.0kb downstream 27026 true Chr02: 15216180-15243205 Gossypium raimondii
Gorai.002G110500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15216180-15221179 Gossypium raimondii
Gorai.002G110500 10.0kb upstream 10.0kb upstream 32026 true Chr02: 15221180-15253205 Gossypium raimondii
Gorai.002G110500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15243206-15253205 Gossypium raimondii
Gorai.002G110500 10.0kb downstream 10.0kb downstream 32026 true Chr02: 15211180-15243205 Gossypium raimondii
Gorai.002G110500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15211180-15221179 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832522 5264 Brassicales-Malvales View MSA
124343757 5266 SBM View MSA
124242671 5268 Malvidae View MSA
124063190 5270 Rosid View MSA
123737868 5271 Pentapetalae View MSA
122769906 5272 Eudicot View MSA
122045886 5273 Angiosperm View MSA
121345720 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain