Gene : Gorai.002G113600 G. raimondii v2.1
Defline:  (1 of 3) PTHR21049:SF1 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1A Genomic Order:  1136
Name:  ? Gorai.002G113600 Secondary Identifier:  ? PAC:26792061
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G113600 0.5kb upstream 0.5kb upstream 4183 true Chr02: 16076006-16080188 Gossypium raimondii
Gorai.002G113600 0.5kb upstream 0.5kb upstream 500 false Chr02: 16076006-16076505 Gossypium raimondii
Gorai.002G113600 0.5kb downstream 0.5kb downstream 4183 true Chr02: 16076506-16080688 Gossypium raimondii
Gorai.002G113600 0.5kb downstream 0.5kb downstream 500 false Chr02: 16080189-16080688 Gossypium raimondii
Gorai.002G113600 1.0kb upstream 1.0kb upstream 4683 true Chr02: 16075506-16080188 Gossypium raimondii
Gorai.002G113600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 16075506-16076505 Gossypium raimondii
Gorai.002G113600 1.0kb downstream 1.0kb downstream 4683 true Chr02: 16076506-16081188 Gossypium raimondii
Gorai.002G113600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 16080189-16081188 Gossypium raimondii
Gorai.002G113600 2.0kb upstream 2.0kb upstream 5683 true Chr02: 16074506-16080188 Gossypium raimondii
Gorai.002G113600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 16074506-16076505 Gossypium raimondii
Gorai.002G113600 2.0kb downstream 2.0kb downstream 5683 true Chr02: 16076506-16082188 Gossypium raimondii
Gorai.002G113600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 16080189-16082188 Gossypium raimondii
Gorai.002G113600 5.0kb upstream 5.0kb upstream 8683 true Chr02: 16071506-16080188 Gossypium raimondii
Gorai.002G113600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 16071506-16076505 Gossypium raimondii
Gorai.002G113600 5.0kb downstream 5.0kb downstream 8683 true Chr02: 16076506-16085188 Gossypium raimondii
Gorai.002G113600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 16080189-16085188 Gossypium raimondii
Gorai.002G113600 10.0kb upstream 10.0kb upstream 13683 true Chr02: 16066506-16080188 Gossypium raimondii
Gorai.002G113600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 16066506-16076505 Gossypium raimondii
Gorai.002G113600 10.0kb downstream 10.0kb downstream 13683 true Chr02: 16076506-16090188 Gossypium raimondii
Gorai.002G113600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 16080189-16090188 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827563 5264 Brassicales-Malvales View MSA
124338985 5266 SBM View MSA
124237474 5268 Malvidae View MSA
124068967 5270 Rosid View MSA
123737223 5271 Pentapetalae View MSA
122791942 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain