Gene : Gorai.002G125100 G. raimondii v2.1
Defline:  (1 of 2) PTHR23083//PTHR23083:SF380 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR Genomic Order:  1251
Name:  ? Gorai.002G125100 Secondary Identifier:  ? PAC:26792486
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G125100 0.5kb upstream 0.5kb upstream 4089 true Chr02: 18576115-18580203 Gossypium raimondii
Gorai.002G125100 0.5kb upstream 0.5kb upstream 500 false Chr02: 18576115-18576614 Gossypium raimondii
Gorai.002G125100 0.5kb downstream 0.5kb downstream 4089 true Chr02: 18576615-18580703 Gossypium raimondii
Gorai.002G125100 0.5kb downstream 0.5kb downstream 500 false Chr02: 18580204-18580703 Gossypium raimondii
Gorai.002G125100 1.0kb upstream 1.0kb upstream 4589 true Chr02: 18575615-18580203 Gossypium raimondii
Gorai.002G125100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 18575615-18576614 Gossypium raimondii
Gorai.002G125100 1.0kb downstream 1.0kb downstream 4589 true Chr02: 18576615-18581203 Gossypium raimondii
Gorai.002G125100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 18580204-18581203 Gossypium raimondii
Gorai.002G125100 2.0kb upstream 2.0kb upstream 5589 true Chr02: 18574615-18580203 Gossypium raimondii
Gorai.002G125100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 18574615-18576614 Gossypium raimondii
Gorai.002G125100 2.0kb downstream 2.0kb downstream 5589 true Chr02: 18576615-18582203 Gossypium raimondii
Gorai.002G125100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 18580204-18582203 Gossypium raimondii
Gorai.002G125100 5.0kb upstream 5.0kb upstream 8589 true Chr02: 18571615-18580203 Gossypium raimondii
Gorai.002G125100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 18571615-18576614 Gossypium raimondii
Gorai.002G125100 5.0kb downstream 5.0kb downstream 8589 true Chr02: 18576615-18585203 Gossypium raimondii
Gorai.002G125100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 18580204-18585203 Gossypium raimondii
Gorai.002G125100 10.0kb upstream 10.0kb upstream 13589 true Chr02: 18566615-18580203 Gossypium raimondii
Gorai.002G125100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 18566615-18576614 Gossypium raimondii
Gorai.002G125100 10.0kb downstream 10.0kb downstream 13589 true Chr02: 18576615-18590203 Gossypium raimondii
Gorai.002G125100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 18580204-18590203 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837177 5264 Brassicales-Malvales View MSA
124340827 5266 SBM View MSA
124238713 5268 Malvidae View MSA
124068399 5270 Rosid View MSA
123739608 5271 Pentapetalae View MSA
122792397 5272 Eudicot View MSA
122043324 5273 Angiosperm View MSA
121346107 5274 Embryophyte View MSA
123380332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain