Gene : Gorai.002G136400 G. raimondii v2.1
Defline:  (1 of 1) PTHR22600//PTHR22600:SF18 - BETA-HEXOSAMINIDASE Genomic Order:  1364
Name:  ? Gorai.002G136400 Secondary Identifier:  ? PAC:26795994
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6902 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G136400 0.5kb upstream 0.5kb upstream 8433 true Chr02: 22812439-22820871 Gossypium raimondii
Gorai.002G136400 0.5kb upstream 0.5kb upstream 500 false Chr02: 22820372-22820871 Gossypium raimondii
Gorai.002G136400 0.5kb downstream 0.5kb downstream 8433 true Chr02: 22811939-22820371 Gossypium raimondii
Gorai.002G136400 0.5kb downstream 0.5kb downstream 500 false Chr02: 22811939-22812438 Gossypium raimondii
Gorai.002G136400 1.0kb upstream 1.0kb upstream 8933 true Chr02: 22812439-22821371 Gossypium raimondii
Gorai.002G136400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 22820372-22821371 Gossypium raimondii
Gorai.002G136400 1.0kb downstream 1.0kb downstream 8933 true Chr02: 22811439-22820371 Gossypium raimondii
Gorai.002G136400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 22811439-22812438 Gossypium raimondii
Gorai.002G136400 2.0kb upstream 2.0kb upstream 9933 true Chr02: 22812439-22822371 Gossypium raimondii
Gorai.002G136400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 22820372-22822371 Gossypium raimondii
Gorai.002G136400 2.0kb downstream 2.0kb downstream 9933 true Chr02: 22810439-22820371 Gossypium raimondii
Gorai.002G136400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 22810439-22812438 Gossypium raimondii
Gorai.002G136400 5.0kb upstream 5.0kb upstream 12933 true Chr02: 22812439-22825371 Gossypium raimondii
Gorai.002G136400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 22820372-22825371 Gossypium raimondii
Gorai.002G136400 5.0kb downstream 5.0kb downstream 12933 true Chr02: 22807439-22820371 Gossypium raimondii
Gorai.002G136400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 22807439-22812438 Gossypium raimondii
Gorai.002G136400 10.0kb upstream 10.0kb upstream 17933 true Chr02: 22812439-22830371 Gossypium raimondii
Gorai.002G136400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 22820372-22830371 Gossypium raimondii
Gorai.002G136400 10.0kb downstream 10.0kb downstream 17933 true Chr02: 22802439-22820371 Gossypium raimondii
Gorai.002G136400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 22802439-22812438 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829142 5264 Brassicales-Malvales View MSA
124337219 5266 SBM View MSA
124240714 5268 Malvidae View MSA
124068580 5270 Rosid View MSA
123738133 5271 Pentapetalae View MSA
122790534 5272 Eudicot View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain