Gene : Gorai.002G141900 G. raimondii v2.1
Defline:  (1 of 2) PTHR13763:SF1 - PROTEIN BREAST CANCER SUSCEPTIBILITY 1 HOMOLOG Genomic Order:  1419
Name:  ? Gorai.002G141900 Secondary Identifier:  ? PAC:26796304
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G141900 0.5kb upstream 0.5kb upstream 6180 true Chr02: 25214472-25220651 Gossypium raimondii
Gorai.002G141900 0.5kb upstream 0.5kb upstream 500 false Chr02: 25214472-25214971 Gossypium raimondii
Gorai.002G141900 0.5kb downstream 0.5kb downstream 6180 true Chr02: 25214972-25221151 Gossypium raimondii
Gorai.002G141900 0.5kb downstream 0.5kb downstream 500 false Chr02: 25220652-25221151 Gossypium raimondii
Gorai.002G141900 1.0kb upstream 1.0kb upstream 6680 true Chr02: 25213972-25220651 Gossypium raimondii
Gorai.002G141900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 25213972-25214971 Gossypium raimondii
Gorai.002G141900 1.0kb downstream 1.0kb downstream 6680 true Chr02: 25214972-25221651 Gossypium raimondii
Gorai.002G141900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 25220652-25221651 Gossypium raimondii
Gorai.002G141900 2.0kb upstream 2.0kb upstream 7680 true Chr02: 25212972-25220651 Gossypium raimondii
Gorai.002G141900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 25212972-25214971 Gossypium raimondii
Gorai.002G141900 2.0kb downstream 2.0kb downstream 7680 true Chr02: 25214972-25222651 Gossypium raimondii
Gorai.002G141900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 25220652-25222651 Gossypium raimondii
Gorai.002G141900 5.0kb upstream 5.0kb upstream 10680 true Chr02: 25209972-25220651 Gossypium raimondii
Gorai.002G141900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 25209972-25214971 Gossypium raimondii
Gorai.002G141900 5.0kb downstream 5.0kb downstream 10680 true Chr02: 25214972-25225651 Gossypium raimondii
Gorai.002G141900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 25220652-25225651 Gossypium raimondii
Gorai.002G141900 10.0kb upstream 10.0kb upstream 15680 true Chr02: 25204972-25220651 Gossypium raimondii
Gorai.002G141900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 25204972-25214971 Gossypium raimondii
Gorai.002G141900 10.0kb downstream 10.0kb downstream 15680 true Chr02: 25214972-25230651 Gossypium raimondii
Gorai.002G141900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 25220652-25230651 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828360 5264 Brassicales-Malvales View MSA
124321529 5266 SBM View MSA
124252293 5268 Malvidae View MSA
124069553 5270 Rosid View MSA
123745741 5271 Pentapetalae View MSA
122790490 5272 Eudicot View MSA
122049651 5273 Angiosperm View MSA
121346797 5274 Embryophyte View MSA
123380447 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain