Gene : Gorai.002G146600 G. raimondii v2.1
Defline:  (1 of 14) PF00124 - Photosynthetic reaction centre protein (Photo_RC) Genomic Order:  1466
Name:  ? Gorai.002G146600 Secondary Identifier:  ? PAC:26792650
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PHOTOALL-PWY Gossypium raimondii pathologic  
Graimondii PWY-101 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G146600 0.5kb upstream 0.5kb upstream 1444 true Chr02: 26980056-26981499 Gossypium raimondii
Gorai.002G146600 0.5kb upstream 0.5kb upstream 500 false Chr02: 26980056-26980555 Gossypium raimondii
Gorai.002G146600 0.5kb downstream 0.5kb downstream 1444 true Chr02: 26980556-26981999 Gossypium raimondii
Gorai.002G146600 0.5kb downstream 0.5kb downstream 500 false Chr02: 26981500-26981999 Gossypium raimondii
Gorai.002G146600 1.0kb upstream 1.0kb upstream 1944 true Chr02: 26979556-26981499 Gossypium raimondii
Gorai.002G146600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 26979556-26980555 Gossypium raimondii
Gorai.002G146600 1.0kb downstream 1.0kb downstream 1944 true Chr02: 26980556-26982499 Gossypium raimondii
Gorai.002G146600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 26981500-26982499 Gossypium raimondii
Gorai.002G146600 2.0kb upstream 2.0kb upstream 2944 true Chr02: 26978556-26981499 Gossypium raimondii
Gorai.002G146600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 26978556-26980555 Gossypium raimondii
Gorai.002G146600 2.0kb downstream 2.0kb downstream 2944 true Chr02: 26980556-26983499 Gossypium raimondii
Gorai.002G146600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 26981500-26983499 Gossypium raimondii
Gorai.002G146600 5.0kb upstream 5.0kb upstream 5944 true Chr02: 26975556-26981499 Gossypium raimondii
Gorai.002G146600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 26975556-26980555 Gossypium raimondii
Gorai.002G146600 5.0kb downstream 5.0kb downstream 5944 true Chr02: 26980556-26986499 Gossypium raimondii
Gorai.002G146600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 26981500-26986499 Gossypium raimondii
Gorai.002G146600 10.0kb upstream 10.0kb upstream 10944 true Chr02: 26970556-26981499 Gossypium raimondii
Gorai.002G146600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 26970556-26980555 Gossypium raimondii
Gorai.002G146600 10.0kb downstream 10.0kb downstream 10944 true Chr02: 26980556-26991499 Gossypium raimondii
Gorai.002G146600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 26981500-26991499 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840556 5264 Brassicales-Malvales View MSA
124322743 5266 SBM View MSA
124253930 5268 Malvidae View MSA
124074892 5270 Rosid View MSA
123753442 5271 Pentapetalae View MSA
122794783 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain