Gene : Gorai.002G161900 G. raimondii v2.1
Defline:  (1 of 2) 6.1.1.21 - Histidine--tRNA ligase / Histidyl-tRNA synthetase Genomic Order:  1619
Name:  ? Gorai.002G161900 Secondary Identifier:  ? PAC:26793930
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRNA-CHARGING-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G161900 0.5kb upstream 0.5kb upstream 5799 true Chr02: 37313389-37319187 Gossypium raimondii
Gorai.002G161900 0.5kb upstream 0.5kb upstream 500 false Chr02: 37318688-37319187 Gossypium raimondii
Gorai.002G161900 0.5kb downstream 0.5kb downstream 5799 true Chr02: 37312889-37318687 Gossypium raimondii
Gorai.002G161900 0.5kb downstream 0.5kb downstream 500 false Chr02: 37312889-37313388 Gossypium raimondii
Gorai.002G161900 1.0kb upstream 1.0kb upstream 6299 true Chr02: 37313389-37319687 Gossypium raimondii
Gorai.002G161900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 37318688-37319687 Gossypium raimondii
Gorai.002G161900 1.0kb downstream 1.0kb downstream 6299 true Chr02: 37312389-37318687 Gossypium raimondii
Gorai.002G161900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37312389-37313388 Gossypium raimondii
Gorai.002G161900 2.0kb upstream 2.0kb upstream 7299 true Chr02: 37313389-37320687 Gossypium raimondii
Gorai.002G161900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 37318688-37320687 Gossypium raimondii
Gorai.002G161900 2.0kb downstream 2.0kb downstream 7299 true Chr02: 37311389-37318687 Gossypium raimondii
Gorai.002G161900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37311389-37313388 Gossypium raimondii
Gorai.002G161900 5.0kb upstream 5.0kb upstream 10299 true Chr02: 37313389-37323687 Gossypium raimondii
Gorai.002G161900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 37318688-37323687 Gossypium raimondii
Gorai.002G161900 5.0kb downstream 5.0kb downstream 10299 true Chr02: 37308389-37318687 Gossypium raimondii
Gorai.002G161900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37308389-37313388 Gossypium raimondii
Gorai.002G161900 10.0kb upstream 10.0kb upstream 15299 true Chr02: 37313389-37328687 Gossypium raimondii
Gorai.002G161900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 37318688-37328687 Gossypium raimondii
Gorai.002G161900 10.0kb downstream 10.0kb downstream 15299 true Chr02: 37303389-37318687 Gossypium raimondii
Gorai.002G161900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37303389-37313388 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828027 5264 Brassicales-Malvales View MSA
124321502 5266 SBM View MSA
124242032 5268 Malvidae View MSA
124069172 5270 Rosid View MSA
123739559 5271 Pentapetalae View MSA
122792579 5272 Eudicot View MSA
122042038 5273 Angiosperm View MSA
121344697 5274 Embryophyte View MSA
123424484 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain