Gene : Gorai.002G161400 G. raimondii v2.1
Defline:  (1 of 2) PTHR31458:SF3 - POLYGALACTURONASE NON-CATALYTIC SUBUNIT JP630-RELATED Genomic Order:  1614
Name:  ? Gorai.002G161400 Secondary Identifier:  ? PAC:26796555
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G161400 0.5kb upstream 0.5kb upstream 2744 true Chr02: 36980355-36983098 Gossypium raimondii
Gorai.002G161400 0.5kb upstream 0.5kb upstream 500 false Chr02: 36980355-36980854 Gossypium raimondii
Gorai.002G161400 0.5kb downstream 0.5kb downstream 2744 true Chr02: 36980855-36983598 Gossypium raimondii
Gorai.002G161400 0.5kb downstream 0.5kb downstream 500 false Chr02: 36983099-36983598 Gossypium raimondii
Gorai.002G161400 1.0kb upstream 1.0kb upstream 3244 true Chr02: 36979855-36983098 Gossypium raimondii
Gorai.002G161400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 36979855-36980854 Gossypium raimondii
Gorai.002G161400 1.0kb downstream 1.0kb downstream 3244 true Chr02: 36980855-36984098 Gossypium raimondii
Gorai.002G161400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 36983099-36984098 Gossypium raimondii
Gorai.002G161400 2.0kb upstream 2.0kb upstream 4244 true Chr02: 36978855-36983098 Gossypium raimondii
Gorai.002G161400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 36978855-36980854 Gossypium raimondii
Gorai.002G161400 2.0kb downstream 2.0kb downstream 4244 true Chr02: 36980855-36985098 Gossypium raimondii
Gorai.002G161400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 36983099-36985098 Gossypium raimondii
Gorai.002G161400 5.0kb upstream 5.0kb upstream 7244 true Chr02: 36975855-36983098 Gossypium raimondii
Gorai.002G161400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 36975855-36980854 Gossypium raimondii
Gorai.002G161400 5.0kb downstream 5.0kb downstream 7244 true Chr02: 36980855-36988098 Gossypium raimondii
Gorai.002G161400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 36983099-36988098 Gossypium raimondii
Gorai.002G161400 10.0kb upstream 10.0kb upstream 12244 true Chr02: 36970855-36983098 Gossypium raimondii
Gorai.002G161400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 36970855-36980854 Gossypium raimondii
Gorai.002G161400 10.0kb downstream 10.0kb downstream 12244 true Chr02: 36980855-36993098 Gossypium raimondii
Gorai.002G161400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 36983099-36993098 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840540 5264 Brassicales-Malvales View MSA
124322738 5266 SBM View MSA
124169209 5268 Malvidae View MSA
124060515 5270 Rosid View MSA
123747690 5271 Pentapetalae View MSA
122795038 5272 Eudicot View MSA
122050223 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain