Gene : Gorai.002G185500 G. raimondii v2.1
Defline:  (1 of 1) PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED Genomic Order:  1855
Name:  ? Gorai.002G185500 Secondary Identifier:  ? PAC:26793619
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1081 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G185500 0.5kb upstream 0.5kb upstream 5785 true Chr02: 49251852-49257636 Gossypium raimondii
Gorai.002G185500 0.5kb upstream 0.5kb upstream 500 false Chr02: 49257137-49257636 Gossypium raimondii
Gorai.002G185500 0.5kb downstream 0.5kb downstream 5785 true Chr02: 49251352-49257136 Gossypium raimondii
Gorai.002G185500 0.5kb downstream 0.5kb downstream 500 false Chr02: 49251352-49251851 Gossypium raimondii
Gorai.002G185500 1.0kb upstream 1.0kb upstream 6285 true Chr02: 49251852-49258136 Gossypium raimondii
Gorai.002G185500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 49257137-49258136 Gossypium raimondii
Gorai.002G185500 1.0kb downstream 1.0kb downstream 6285 true Chr02: 49250852-49257136 Gossypium raimondii
Gorai.002G185500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 49250852-49251851 Gossypium raimondii
Gorai.002G185500 2.0kb upstream 2.0kb upstream 7285 true Chr02: 49251852-49259136 Gossypium raimondii
Gorai.002G185500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 49257137-49259136 Gossypium raimondii
Gorai.002G185500 2.0kb downstream 2.0kb downstream 7285 true Chr02: 49249852-49257136 Gossypium raimondii
Gorai.002G185500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 49249852-49251851 Gossypium raimondii
Gorai.002G185500 5.0kb upstream 5.0kb upstream 10285 true Chr02: 49251852-49262136 Gossypium raimondii
Gorai.002G185500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 49257137-49262136 Gossypium raimondii
Gorai.002G185500 5.0kb downstream 5.0kb downstream 10285 true Chr02: 49246852-49257136 Gossypium raimondii
Gorai.002G185500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 49246852-49251851 Gossypium raimondii
Gorai.002G185500 10.0kb upstream 10.0kb upstream 15285 true Chr02: 49251852-49267136 Gossypium raimondii
Gorai.002G185500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 49257137-49267136 Gossypium raimondii
Gorai.002G185500 10.0kb downstream 10.0kb downstream 15285 true Chr02: 49241852-49257136 Gossypium raimondii
Gorai.002G185500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 49241852-49251851 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123804985 5264 Brassicales-Malvales Singleton cluster - no MSA
124301985 5266 SBM Singleton cluster - no MSA
124254286 5268 Malvidae View MSA
124062237 5270 Rosid View MSA
123747899 5271 Pentapetalae View MSA
122789338 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain