Gene : Gorai.002G183400 G. raimondii v2.1
Defline:  (1 of 2) PTHR21649:SF13 - LHCA2 PROTEIN Genomic Order:  1834
Name:  ? Gorai.002G183400 Secondary Identifier:  ? PAC:26792964
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G183400 0.5kb upstream 0.5kb upstream 2230 true Chr02: 48350376-48352605 Gossypium raimondii
Gorai.002G183400 0.5kb upstream 0.5kb upstream 500 false Chr02: 48352106-48352605 Gossypium raimondii
Gorai.002G183400 0.5kb downstream 0.5kb downstream 2230 true Chr02: 48349876-48352105 Gossypium raimondii
Gorai.002G183400 0.5kb downstream 0.5kb downstream 500 false Chr02: 48349876-48350375 Gossypium raimondii
Gorai.002G183400 1.0kb upstream 1.0kb upstream 2730 true Chr02: 48350376-48353105 Gossypium raimondii
Gorai.002G183400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48352106-48353105 Gossypium raimondii
Gorai.002G183400 1.0kb downstream 1.0kb downstream 2730 true Chr02: 48349376-48352105 Gossypium raimondii
Gorai.002G183400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48349376-48350375 Gossypium raimondii
Gorai.002G183400 2.0kb upstream 2.0kb upstream 3730 true Chr02: 48350376-48354105 Gossypium raimondii
Gorai.002G183400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48352106-48354105 Gossypium raimondii
Gorai.002G183400 2.0kb downstream 2.0kb downstream 3730 true Chr02: 48348376-48352105 Gossypium raimondii
Gorai.002G183400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48348376-48350375 Gossypium raimondii
Gorai.002G183400 5.0kb upstream 5.0kb upstream 6730 true Chr02: 48350376-48357105 Gossypium raimondii
Gorai.002G183400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48352106-48357105 Gossypium raimondii
Gorai.002G183400 5.0kb downstream 5.0kb downstream 6730 true Chr02: 48345376-48352105 Gossypium raimondii
Gorai.002G183400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48345376-48350375 Gossypium raimondii
Gorai.002G183400 10.0kb upstream 10.0kb upstream 11730 true Chr02: 48350376-48362105 Gossypium raimondii
Gorai.002G183400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48352106-48362105 Gossypium raimondii
Gorai.002G183400 10.0kb downstream 10.0kb downstream 11730 true Chr02: 48340376-48352105 Gossypium raimondii
Gorai.002G183400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48340376-48350375 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840069 5264 Brassicales-Malvales View MSA
124341873 5266 SBM View MSA
124241980 5268 Malvidae View MSA
124065144 5270 Rosid View MSA
123742469 5271 Pentapetalae View MSA
122790167 5272 Eudicot View MSA
122046380 5273 Angiosperm View MSA
121344826 5274 Embryophyte View MSA
123425939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain