Gene : Gorai.002G190000 G. raimondii v2.1
Defline:  (1 of 1) PTHR34790:SF1 - PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC Genomic Order:  1900
Name:  ? Gorai.002G190000 Secondary Identifier:  ? PAC:26793941
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G190000 0.5kb upstream 0.5kb upstream 1681 true Chr02: 51218355-51220035 Gossypium raimondii
Gorai.002G190000 0.5kb upstream 0.5kb upstream 500 false Chr02: 51218355-51218854 Gossypium raimondii
Gorai.002G190000 0.5kb downstream 0.5kb downstream 1681 true Chr02: 51218855-51220535 Gossypium raimondii
Gorai.002G190000 0.5kb downstream 0.5kb downstream 500 false Chr02: 51220036-51220535 Gossypium raimondii
Gorai.002G190000 1.0kb upstream 1.0kb upstream 2181 true Chr02: 51217855-51220035 Gossypium raimondii
Gorai.002G190000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 51217855-51218854 Gossypium raimondii
Gorai.002G190000 1.0kb downstream 1.0kb downstream 2181 true Chr02: 51218855-51221035 Gossypium raimondii
Gorai.002G190000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 51220036-51221035 Gossypium raimondii
Gorai.002G190000 2.0kb upstream 2.0kb upstream 3181 true Chr02: 51216855-51220035 Gossypium raimondii
Gorai.002G190000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 51216855-51218854 Gossypium raimondii
Gorai.002G190000 2.0kb downstream 2.0kb downstream 3181 true Chr02: 51218855-51222035 Gossypium raimondii
Gorai.002G190000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 51220036-51222035 Gossypium raimondii
Gorai.002G190000 5.0kb upstream 5.0kb upstream 6181 true Chr02: 51213855-51220035 Gossypium raimondii
Gorai.002G190000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 51213855-51218854 Gossypium raimondii
Gorai.002G190000 5.0kb downstream 5.0kb downstream 6181 true Chr02: 51218855-51225035 Gossypium raimondii
Gorai.002G190000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 51220036-51225035 Gossypium raimondii
Gorai.002G190000 10.0kb upstream 10.0kb upstream 11181 true Chr02: 51208855-51220035 Gossypium raimondii
Gorai.002G190000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 51208855-51218854 Gossypium raimondii
Gorai.002G190000 10.0kb downstream 10.0kb downstream 11181 true Chr02: 51218855-51230035 Gossypium raimondii
Gorai.002G190000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 51220036-51230035 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839306 5264 Brassicales-Malvales View MSA
124346092 5266 SBM View MSA
124244103 5268 Malvidae View MSA
124068149 5270 Rosid View MSA
123737018 5271 Pentapetalae View MSA
122795977 5272 Eudicot View MSA
122044260 5273 Angiosperm View MSA
121349394 5274 Embryophyte View MSA
123426328 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain