Gene : Gorai.002G196100 G. raimondii v2.1
Defline:  (1 of 5) PTHR10031:SF6 - ATP SYNTHASE SUBUNIT C, CHLOROPLASTIC Genomic Order:  1961
Name:  ? Gorai.002G196100 Secondary Identifier:  ? PAC:26796439
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6126 Gossypium raimondii pathologic  
Graimondii PWY-7219 Gossypium raimondii pathologic  
Graimondii PWY-7229 Gossypium raimondii pathologic  
Graimondii PWY-841 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G196100 0.5kb upstream 0.5kb upstream 949 true Chr02: 53130464-53131412 Gossypium raimondii
Gorai.002G196100 0.5kb upstream 0.5kb upstream 500 false Chr02: 53130913-53131412 Gossypium raimondii
Gorai.002G196100 0.5kb downstream 0.5kb downstream 949 true Chr02: 53129964-53130912 Gossypium raimondii
Gorai.002G196100 0.5kb downstream 0.5kb downstream 500 false Chr02: 53129964-53130463 Gossypium raimondii
Gorai.002G196100 1.0kb upstream 1.0kb upstream 1449 true Chr02: 53130464-53131912 Gossypium raimondii
Gorai.002G196100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 53130913-53131912 Gossypium raimondii
Gorai.002G196100 1.0kb downstream 1.0kb downstream 1449 true Chr02: 53129464-53130912 Gossypium raimondii
Gorai.002G196100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 53129464-53130463 Gossypium raimondii
Gorai.002G196100 2.0kb upstream 2.0kb upstream 2449 true Chr02: 53130464-53132912 Gossypium raimondii
Gorai.002G196100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 53130913-53132912 Gossypium raimondii
Gorai.002G196100 2.0kb downstream 2.0kb downstream 2449 true Chr02: 53128464-53130912 Gossypium raimondii
Gorai.002G196100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 53128464-53130463 Gossypium raimondii
Gorai.002G196100 5.0kb upstream 5.0kb upstream 5449 true Chr02: 53130464-53135912 Gossypium raimondii
Gorai.002G196100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 53130913-53135912 Gossypium raimondii
Gorai.002G196100 5.0kb downstream 5.0kb downstream 5449 true Chr02: 53125464-53130912 Gossypium raimondii
Gorai.002G196100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 53125464-53130463 Gossypium raimondii
Gorai.002G196100 10.0kb upstream 10.0kb upstream 10449 true Chr02: 53130464-53140912 Gossypium raimondii
Gorai.002G196100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 53130913-53140912 Gossypium raimondii
Gorai.002G196100 10.0kb downstream 10.0kb downstream 10449 true Chr02: 53120464-53130912 Gossypium raimondii
Gorai.002G196100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 53120464-53130463 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028907 5273 Angiosperm View MSA
123805353 5264 Brassicales-Malvales Singleton cluster - no MSA
124302329 5266 SBM Singleton cluster - no MSA
124153178 5268 Malvidae Singleton cluster - no MSA
123878336 5270 Rosid Singleton cluster - no MSA
123461748 5271 Pentapetalae Singleton cluster - no MSA
122797516 5272 Eudicot View MSA
121351324 5274 Embryophyte View MSA
123428045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain