Gene : Gorai.002G214200 G. raimondii v2.1
Defline:  (1 of 1) PTHR24096:SF134 - LONG CHAIN ACYL-COA SYNTHETASE 2 Genomic Order:  2142
Name:  ? Gorai.002G214200 Secondary Identifier:  ? PAC:26792924
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1121 Gossypium raimondii pathologic  
Graimondii PWY-321 Gossypium raimondii pathologic  
Graimondii PWY-5136 Gossypium raimondii pathologic  
Graimondii PWY-5143 Gossypium raimondii pathologic  
Graimondii PWY-5147 Gossypium raimondii pathologic  
Graimondii PWY-5156 Gossypium raimondii pathologic  
Graimondii PWY-561 Gossypium raimondii pathologic  
Graimondii PWY-5885 Gossypium raimondii pathologic  
Graimondii PWY-5971 Gossypium raimondii pathologic  
Graimondii PWY-5989 Gossypium raimondii pathologic  
Graimondii PWY66-389 Gossypium raimondii pathologic  
Graimondii PWY-6733 Gossypium raimondii pathologic  
Graimondii PWY-6803 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G214200 0.5kb upstream 0.5kb upstream 5541 true Chr02: 56299657-56305197 Gossypium raimondii
Gorai.002G214200 0.5kb upstream 0.5kb upstream 500 false Chr02: 56299657-56300156 Gossypium raimondii
Gorai.002G214200 0.5kb downstream 0.5kb downstream 5541 true Chr02: 56300157-56305697 Gossypium raimondii
Gorai.002G214200 0.5kb downstream 0.5kb downstream 500 false Chr02: 56305198-56305697 Gossypium raimondii
Gorai.002G214200 1.0kb upstream 1.0kb upstream 6041 true Chr02: 56299157-56305197 Gossypium raimondii
Gorai.002G214200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 56299157-56300156 Gossypium raimondii
Gorai.002G214200 1.0kb downstream 1.0kb downstream 6041 true Chr02: 56300157-56306197 Gossypium raimondii
Gorai.002G214200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 56305198-56306197 Gossypium raimondii
Gorai.002G214200 2.0kb upstream 2.0kb upstream 7041 true Chr02: 56298157-56305197 Gossypium raimondii
Gorai.002G214200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 56298157-56300156 Gossypium raimondii
Gorai.002G214200 2.0kb downstream 2.0kb downstream 7041 true Chr02: 56300157-56307197 Gossypium raimondii
Gorai.002G214200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 56305198-56307197 Gossypium raimondii
Gorai.002G214200 5.0kb upstream 5.0kb upstream 10041 true Chr02: 56295157-56305197 Gossypium raimondii
Gorai.002G214200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 56295157-56300156 Gossypium raimondii
Gorai.002G214200 5.0kb downstream 5.0kb downstream 10041 true Chr02: 56300157-56310197 Gossypium raimondii
Gorai.002G214200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 56305198-56310197 Gossypium raimondii
Gorai.002G214200 10.0kb upstream 10.0kb upstream 15041 true Chr02: 56290157-56305197 Gossypium raimondii
Gorai.002G214200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 56290157-56300156 Gossypium raimondii
Gorai.002G214200 10.0kb downstream 10.0kb downstream 15041 true Chr02: 56300157-56315197 Gossypium raimondii
Gorai.002G214200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 56305198-56315197 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830194 5264 Brassicales-Malvales View MSA
124339284 5266 SBM View MSA
124245132 5268 Malvidae View MSA
124069008 5270 Rosid View MSA
123751064 5271 Pentapetalae View MSA
122791747 5272 Eudicot View MSA
122047711 5273 Angiosperm View MSA
121350386 5274 Embryophyte View MSA
123426542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain