Gene : Gorai.002G223600 G. raimondii v2.1
Defline:  (1 of 7) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  2236
Name:  ? Gorai.002G223600 Secondary Identifier:  ? PAC:26793516
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G223600 0.5kb upstream 0.5kb upstream 3595 true Chr02: 57905940-57909534 Gossypium raimondii
Gorai.002G223600 0.5kb upstream 0.5kb upstream 500 false Chr02: 57909035-57909534 Gossypium raimondii
Gorai.002G223600 0.5kb downstream 0.5kb downstream 3595 true Chr02: 57905440-57909034 Gossypium raimondii
Gorai.002G223600 0.5kb downstream 0.5kb downstream 500 false Chr02: 57905440-57905939 Gossypium raimondii
Gorai.002G223600 1.0kb upstream 1.0kb upstream 4095 true Chr02: 57905940-57910034 Gossypium raimondii
Gorai.002G223600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 57909035-57910034 Gossypium raimondii
Gorai.002G223600 1.0kb downstream 1.0kb downstream 4095 true Chr02: 57904940-57909034 Gossypium raimondii
Gorai.002G223600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 57904940-57905939 Gossypium raimondii
Gorai.002G223600 2.0kb upstream 2.0kb upstream 5095 true Chr02: 57905940-57911034 Gossypium raimondii
Gorai.002G223600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 57909035-57911034 Gossypium raimondii
Gorai.002G223600 2.0kb downstream 2.0kb downstream 5095 true Chr02: 57903940-57909034 Gossypium raimondii
Gorai.002G223600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 57903940-57905939 Gossypium raimondii
Gorai.002G223600 5.0kb upstream 5.0kb upstream 8095 true Chr02: 57905940-57914034 Gossypium raimondii
Gorai.002G223600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 57909035-57914034 Gossypium raimondii
Gorai.002G223600 5.0kb downstream 5.0kb downstream 8095 true Chr02: 57900940-57909034 Gossypium raimondii
Gorai.002G223600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 57900940-57905939 Gossypium raimondii
Gorai.002G223600 10.0kb upstream 10.0kb upstream 13095 true Chr02: 57905940-57919034 Gossypium raimondii
Gorai.002G223600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 57909035-57919034 Gossypium raimondii
Gorai.002G223600 10.0kb downstream 10.0kb downstream 13095 true Chr02: 57895940-57909034 Gossypium raimondii
Gorai.002G223600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 57895940-57905939 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840552 5264 Brassicales-Malvales View MSA
124344674 5266 SBM View MSA
124246222 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain