Gene : Gorai.002G242800 G. raimondii v2.1
Defline:  (1 of 5) PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED Genomic Order:  2428
Name:  ? Gorai.002G242800 Secondary Identifier:  ? PAC:26792851
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G242800 0.5kb upstream 0.5kb upstream 8514 true Chr02: 60690943-60699456 Gossypium raimondii
Gorai.002G242800 0.5kb upstream 0.5kb upstream 500 false Chr02: 60690943-60691442 Gossypium raimondii
Gorai.002G242800 0.5kb downstream 0.5kb downstream 8514 true Chr02: 60691443-60699956 Gossypium raimondii
Gorai.002G242800 0.5kb downstream 0.5kb downstream 500 false Chr02: 60699457-60699956 Gossypium raimondii
Gorai.002G242800 1.0kb upstream 1.0kb upstream 9014 true Chr02: 60690443-60699456 Gossypium raimondii
Gorai.002G242800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 60690443-60691442 Gossypium raimondii
Gorai.002G242800 1.0kb downstream 1.0kb downstream 9014 true Chr02: 60691443-60700456 Gossypium raimondii
Gorai.002G242800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 60699457-60700456 Gossypium raimondii
Gorai.002G242800 2.0kb upstream 2.0kb upstream 10014 true Chr02: 60689443-60699456 Gossypium raimondii
Gorai.002G242800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 60689443-60691442 Gossypium raimondii
Gorai.002G242800 2.0kb downstream 2.0kb downstream 10014 true Chr02: 60691443-60701456 Gossypium raimondii
Gorai.002G242800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 60699457-60701456 Gossypium raimondii
Gorai.002G242800 5.0kb upstream 5.0kb upstream 13014 true Chr02: 60686443-60699456 Gossypium raimondii
Gorai.002G242800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 60686443-60691442 Gossypium raimondii
Gorai.002G242800 5.0kb downstream 5.0kb downstream 13014 true Chr02: 60691443-60704456 Gossypium raimondii
Gorai.002G242800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 60699457-60704456 Gossypium raimondii
Gorai.002G242800 10.0kb upstream 10.0kb upstream 18014 true Chr02: 60681443-60699456 Gossypium raimondii
Gorai.002G242800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 60681443-60691442 Gossypium raimondii
Gorai.002G242800 10.0kb downstream 10.0kb downstream 18014 true Chr02: 60691443-60709456 Gossypium raimondii
Gorai.002G242800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 60699457-60709456 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123804889 5264 Brassicales-Malvales Singleton cluster - no MSA
124301898 5266 SBM Singleton cluster - no MSA
124256670 5268 Malvidae View MSA
124041656 5270 Rosid View MSA
123749750 5271 Pentapetalae View MSA
122797243 5272 Eudicot View MSA
122051478 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121349885 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain