Gene : Gorai.002G245000 G. raimondii v2.1
Defline:  (1 of 14) PTHR11254 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE Genomic Order:  2450
Name:  ? Gorai.002G245000 Secondary Identifier:  ? PAC:26796161
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G245000 0.5kb upstream 0.5kb upstream 8949 true Chr02: 60902020-60910968 Gossypium raimondii
Gorai.002G245000 0.5kb upstream 0.5kb upstream 500 false Chr02: 60902020-60902519 Gossypium raimondii
Gorai.002G245000 0.5kb downstream 0.5kb downstream 8949 true Chr02: 60902520-60911468 Gossypium raimondii
Gorai.002G245000 0.5kb downstream 0.5kb downstream 500 false Chr02: 60910969-60911468 Gossypium raimondii
Gorai.002G245000 1.0kb upstream 1.0kb upstream 9449 true Chr02: 60901520-60910968 Gossypium raimondii
Gorai.002G245000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 60901520-60902519 Gossypium raimondii
Gorai.002G245000 1.0kb downstream 1.0kb downstream 9449 true Chr02: 60902520-60911968 Gossypium raimondii
Gorai.002G245000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 60910969-60911968 Gossypium raimondii
Gorai.002G245000 2.0kb upstream 2.0kb upstream 10449 true Chr02: 60900520-60910968 Gossypium raimondii
Gorai.002G245000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 60900520-60902519 Gossypium raimondii
Gorai.002G245000 2.0kb downstream 2.0kb downstream 10449 true Chr02: 60902520-60912968 Gossypium raimondii
Gorai.002G245000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 60910969-60912968 Gossypium raimondii
Gorai.002G245000 5.0kb upstream 5.0kb upstream 13449 true Chr02: 60897520-60910968 Gossypium raimondii
Gorai.002G245000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 60897520-60902519 Gossypium raimondii
Gorai.002G245000 5.0kb downstream 5.0kb downstream 13449 true Chr02: 60902520-60915968 Gossypium raimondii
Gorai.002G245000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 60910969-60915968 Gossypium raimondii
Gorai.002G245000 10.0kb upstream 10.0kb upstream 18449 true Chr02: 60892520-60910968 Gossypium raimondii
Gorai.002G245000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 60892520-60902519 Gossypium raimondii
Gorai.002G245000 10.0kb downstream 10.0kb downstream 18449 true Chr02: 60902520-60920968 Gossypium raimondii
Gorai.002G245000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 60910969-60920968 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827587 5264 Brassicales-Malvales View MSA
124346572 5266 SBM View MSA
124252639 5268 Malvidae View MSA
124065760 5270 Rosid View MSA
123737097 5271 Pentapetalae View MSA
122793139 5272 Eudicot View MSA
122047566 5273 Angiosperm View MSA
123429069 5275 Viridiplantae View MSA
121351552 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain