Gene : Gorai.002G257100 G. raimondii v2.1
Defline:  (1 of 6) PTHR11709:SF66 - LACCASE-17 Genomic Order:  2571
Name:  ? Gorai.002G257100 Secondary Identifier:  ? PAC:26796373
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5466 Gossypium raimondii pathologic  
Graimondii PWY-6824 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G257100 0.5kb upstream 0.5kb upstream 4952 true Chr02: 61888799-61893750 Gossypium raimondii
Gorai.002G257100 0.5kb upstream 0.5kb upstream 500 false Chr02: 61893251-61893750 Gossypium raimondii
Gorai.002G257100 0.5kb downstream 0.5kb downstream 4952 true Chr02: 61888299-61893250 Gossypium raimondii
Gorai.002G257100 0.5kb downstream 0.5kb downstream 500 false Chr02: 61888299-61888798 Gossypium raimondii
Gorai.002G257100 1.0kb upstream 1.0kb upstream 5452 true Chr02: 61888799-61894250 Gossypium raimondii
Gorai.002G257100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 61893251-61894250 Gossypium raimondii
Gorai.002G257100 1.0kb downstream 1.0kb downstream 5452 true Chr02: 61887799-61893250 Gossypium raimondii
Gorai.002G257100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 61887799-61888798 Gossypium raimondii
Gorai.002G257100 2.0kb upstream 2.0kb upstream 6452 true Chr02: 61888799-61895250 Gossypium raimondii
Gorai.002G257100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 61893251-61895250 Gossypium raimondii
Gorai.002G257100 2.0kb downstream 2.0kb downstream 6452 true Chr02: 61886799-61893250 Gossypium raimondii
Gorai.002G257100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 61886799-61888798 Gossypium raimondii
Gorai.002G257100 5.0kb upstream 5.0kb upstream 9452 true Chr02: 61888799-61898250 Gossypium raimondii
Gorai.002G257100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 61893251-61898250 Gossypium raimondii
Gorai.002G257100 5.0kb downstream 5.0kb downstream 9452 true Chr02: 61883799-61893250 Gossypium raimondii
Gorai.002G257100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 61883799-61888798 Gossypium raimondii
Gorai.002G257100 10.0kb upstream 10.0kb upstream 14452 true Chr02: 61888799-61903250 Gossypium raimondii
Gorai.002G257100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 61893251-61903250 Gossypium raimondii
Gorai.002G257100 10.0kb downstream 10.0kb downstream 14452 true Chr02: 61878799-61893250 Gossypium raimondii
Gorai.002G257100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 61878799-61888798 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123805338 5264 Brassicales-Malvales Singleton cluster - no MSA
124302314 5266 SBM Singleton cluster - no MSA
124253121 5268 Malvidae View MSA
124069683 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain