Gene : Gorai.003G018000 G. raimondii v2.1
Defline:  (1 of 2) PTHR16201:SF43 - PQ-LOOP REPEAT FAMILY PROTEIN / TRANSMEMBRANE FAMILY PROTEIN Genomic Order:  180
Name:  ? Gorai.003G018000 Secondary Identifier:  ? PAC:26800683
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G018000 0.5kb upstream 0.5kb upstream 3982 true Chr03: 1293476-1297457 Gossypium raimondii
Gorai.003G018000 0.5kb upstream 0.5kb upstream 500 false Chr03: 1296958-1297457 Gossypium raimondii
Gorai.003G018000 0.5kb downstream 0.5kb downstream 3982 true Chr03: 1292976-1296957 Gossypium raimondii
Gorai.003G018000 0.5kb downstream 0.5kb downstream 500 false Chr03: 1292976-1293475 Gossypium raimondii
Gorai.003G018000 1.0kb upstream 1.0kb upstream 4482 true Chr03: 1293476-1297957 Gossypium raimondii
Gorai.003G018000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1296958-1297957 Gossypium raimondii
Gorai.003G018000 1.0kb downstream 1.0kb downstream 4482 true Chr03: 1292476-1296957 Gossypium raimondii
Gorai.003G018000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1292476-1293475 Gossypium raimondii
Gorai.003G018000 2.0kb upstream 2.0kb upstream 5482 true Chr03: 1293476-1298957 Gossypium raimondii
Gorai.003G018000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1296958-1298957 Gossypium raimondii
Gorai.003G018000 2.0kb downstream 2.0kb downstream 5482 true Chr03: 1291476-1296957 Gossypium raimondii
Gorai.003G018000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1291476-1293475 Gossypium raimondii
Gorai.003G018000 5.0kb upstream 5.0kb upstream 8482 true Chr03: 1293476-1301957 Gossypium raimondii
Gorai.003G018000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1296958-1301957 Gossypium raimondii
Gorai.003G018000 5.0kb downstream 5.0kb downstream 8482 true Chr03: 1288476-1296957 Gossypium raimondii
Gorai.003G018000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1288476-1293475 Gossypium raimondii
Gorai.003G018000 10.0kb upstream 10.0kb upstream 13482 true Chr03: 1293476-1306957 Gossypium raimondii
Gorai.003G018000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1296958-1306957 Gossypium raimondii
Gorai.003G018000 10.0kb downstream 10.0kb downstream 13482 true Chr03: 1283476-1296957 Gossypium raimondii
Gorai.003G018000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1283476-1293475 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833507 5264 Brassicales-Malvales View MSA
124346212 5266 SBM View MSA
124242114 5268 Malvidae View MSA
124069228 5270 Rosid View MSA
123744314 5271 Pentapetalae View MSA
122789645 5272 Eudicot View MSA
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain