Gene : Gorai.003G034000 G. raimondii v2.1
Defline:  (1 of 2) PTHR11504 - CYTOCHROME C OXIDASE POLYPEPTIDE VIA Genomic Order:  340
Name:  ? Gorai.003G034000 Secondary Identifier:  ? PAC:26799514
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-3781 Gossypium raimondii pathologic  
Graimondii PWY-7279 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G034000 0.5kb upstream 0.5kb upstream 3135 true Chr03: 3336098-3339232 Gossypium raimondii
Gorai.003G034000 0.5kb upstream 0.5kb upstream 500 false Chr03: 3338733-3339232 Gossypium raimondii
Gorai.003G034000 0.5kb downstream 0.5kb downstream 3135 true Chr03: 3335598-3338732 Gossypium raimondii
Gorai.003G034000 0.5kb downstream 0.5kb downstream 500 false Chr03: 3335598-3336097 Gossypium raimondii
Gorai.003G034000 1.0kb upstream 1.0kb upstream 3635 true Chr03: 3336098-3339732 Gossypium raimondii
Gorai.003G034000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3338733-3339732 Gossypium raimondii
Gorai.003G034000 1.0kb downstream 1.0kb downstream 3635 true Chr03: 3335098-3338732 Gossypium raimondii
Gorai.003G034000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3335098-3336097 Gossypium raimondii
Gorai.003G034000 2.0kb upstream 2.0kb upstream 4635 true Chr03: 3336098-3340732 Gossypium raimondii
Gorai.003G034000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3338733-3340732 Gossypium raimondii
Gorai.003G034000 2.0kb downstream 2.0kb downstream 4635 true Chr03: 3334098-3338732 Gossypium raimondii
Gorai.003G034000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3334098-3336097 Gossypium raimondii
Gorai.003G034000 5.0kb upstream 5.0kb upstream 7635 true Chr03: 3336098-3343732 Gossypium raimondii
Gorai.003G034000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3338733-3343732 Gossypium raimondii
Gorai.003G034000 5.0kb downstream 5.0kb downstream 7635 true Chr03: 3331098-3338732 Gossypium raimondii
Gorai.003G034000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3331098-3336097 Gossypium raimondii
Gorai.003G034000 10.0kb upstream 10.0kb upstream 12635 true Chr03: 3336098-3348732 Gossypium raimondii
Gorai.003G034000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3338733-3348732 Gossypium raimondii
Gorai.003G034000 10.0kb downstream 10.0kb downstream 12635 true Chr03: 3326098-3338732 Gossypium raimondii
Gorai.003G034000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3326098-3336097 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835033 5264 Brassicales-Malvales View MSA
124338719 5266 SBM View MSA
124238315 5268 Malvidae View MSA
124061268 5270 Rosid View MSA
123742807 5271 Pentapetalae View MSA
122787280 5272 Eudicot View MSA
122043726 5273 Angiosperm View MSA
121349010 5274 Embryophyte View MSA
123424511 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain