Gene : Gorai.003G047100 G. raimondii v2.1
Defline:  (1 of 2) 2.4.1.25 - 4-alpha-glucanotransferase / Oligo-1,4-1,4-glucantransferase Genomic Order:  471
Name:  ? Gorai.003G047100 Secondary Identifier:  ? PAC:26798163
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6724 Gossypium raimondii pathologic  
Graimondii PWY-7238 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G047100 0.5kb upstream 0.5kb upstream 11952 true Chr03: 6316504-6328455 Gossypium raimondii
Gorai.003G047100 0.5kb upstream 0.5kb upstream 500 false Chr03: 6316504-6317003 Gossypium raimondii
Gorai.003G047100 0.5kb downstream 0.5kb downstream 11952 true Chr03: 6317004-6328955 Gossypium raimondii
Gorai.003G047100 0.5kb downstream 0.5kb downstream 500 false Chr03: 6328456-6328955 Gossypium raimondii
Gorai.003G047100 1.0kb upstream 1.0kb upstream 12452 true Chr03: 6316004-6328455 Gossypium raimondii
Gorai.003G047100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6316004-6317003 Gossypium raimondii
Gorai.003G047100 1.0kb downstream 1.0kb downstream 12452 true Chr03: 6317004-6329455 Gossypium raimondii
Gorai.003G047100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6328456-6329455 Gossypium raimondii
Gorai.003G047100 2.0kb upstream 2.0kb upstream 13452 true Chr03: 6315004-6328455 Gossypium raimondii
Gorai.003G047100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6315004-6317003 Gossypium raimondii
Gorai.003G047100 2.0kb downstream 2.0kb downstream 13452 true Chr03: 6317004-6330455 Gossypium raimondii
Gorai.003G047100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6328456-6330455 Gossypium raimondii
Gorai.003G047100 5.0kb upstream 5.0kb upstream 16452 true Chr03: 6312004-6328455 Gossypium raimondii
Gorai.003G047100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6312004-6317003 Gossypium raimondii
Gorai.003G047100 5.0kb downstream 5.0kb downstream 16452 true Chr03: 6317004-6333455 Gossypium raimondii
Gorai.003G047100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6328456-6333455 Gossypium raimondii
Gorai.003G047100 10.0kb upstream 10.0kb upstream 21452 true Chr03: 6307004-6328455 Gossypium raimondii
Gorai.003G047100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6307004-6317003 Gossypium raimondii
Gorai.003G047100 10.0kb downstream 10.0kb downstream 21452 true Chr03: 6317004-6338455 Gossypium raimondii
Gorai.003G047100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6328456-6338455 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836816 5264 Brassicales-Malvales View MSA
124346819 5266 SBM View MSA
124246135 5268 Malvidae View MSA
124069427 5270 Rosid View MSA
123741915 5271 Pentapetalae View MSA
122794283 5272 Eudicot View MSA
122048475 5273 Angiosperm View MSA
121348239 5274 Embryophyte View MSA
123427426 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain