Gene : Gorai.003G045100 G. raimondii v2.1
Defline:  (1 of 2) 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Genomic Order:  451
Name:  ? Gorai.003G045100 Secondary Identifier:  ? PAC:26799237
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5466 Gossypium raimondii pathologic  
Graimondii PWY-6824 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G045100 0.5kb upstream 0.5kb upstream 2559 true Chr03: 5899232-5901790 Gossypium raimondii
Gorai.003G045100 0.5kb upstream 0.5kb upstream 500 false Chr03: 5899232-5899731 Gossypium raimondii
Gorai.003G045100 0.5kb downstream 0.5kb downstream 2559 true Chr03: 5899732-5902290 Gossypium raimondii
Gorai.003G045100 0.5kb downstream 0.5kb downstream 500 false Chr03: 5901791-5902290 Gossypium raimondii
Gorai.003G045100 1.0kb upstream 1.0kb upstream 3059 true Chr03: 5898732-5901790 Gossypium raimondii
Gorai.003G045100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 5898732-5899731 Gossypium raimondii
Gorai.003G045100 1.0kb downstream 1.0kb downstream 3059 true Chr03: 5899732-5902790 Gossypium raimondii
Gorai.003G045100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 5901791-5902790 Gossypium raimondii
Gorai.003G045100 2.0kb upstream 2.0kb upstream 4059 true Chr03: 5897732-5901790 Gossypium raimondii
Gorai.003G045100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 5897732-5899731 Gossypium raimondii
Gorai.003G045100 2.0kb downstream 2.0kb downstream 4059 true Chr03: 5899732-5903790 Gossypium raimondii
Gorai.003G045100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 5901791-5903790 Gossypium raimondii
Gorai.003G045100 5.0kb upstream 5.0kb upstream 7059 true Chr03: 5894732-5901790 Gossypium raimondii
Gorai.003G045100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 5894732-5899731 Gossypium raimondii
Gorai.003G045100 5.0kb downstream 5.0kb downstream 7059 true Chr03: 5899732-5906790 Gossypium raimondii
Gorai.003G045100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 5901791-5906790 Gossypium raimondii
Gorai.003G045100 10.0kb upstream 10.0kb upstream 12059 true Chr03: 5889732-5901790 Gossypium raimondii
Gorai.003G045100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 5889732-5899731 Gossypium raimondii
Gorai.003G045100 10.0kb downstream 10.0kb downstream 12059 true Chr03: 5899732-5911790 Gossypium raimondii
Gorai.003G045100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 5901791-5911790 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836254 5264 Brassicales-Malvales View MSA
124342178 5266 SBM View MSA
124254383 5268 Malvidae View MSA
124065870 5270 Rosid View MSA
123745907 5271 Pentapetalae View MSA
122793198 5272 Eudicot View MSA
122046121 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain