Gene : Gorai.003G048900 G. raimondii v2.1
Defline:  (1 of 2) PTHR11573 - RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN Genomic Order:  489
Name:  ? Gorai.003G048900 Secondary Identifier:  ? PAC:26799154
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Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6126 Gossypium raimondii pathologic  
Graimondii PWY-6545 Gossypium raimondii pathologic  
Graimondii PWY-7184 Gossypium raimondii pathologic  
Graimondii PWY-7210 Gossypium raimondii pathologic  
Graimondii PWY-7211 Gossypium raimondii pathologic  
Graimondii PWY-7220 Gossypium raimondii pathologic  
Graimondii PWY-7222 Gossypium raimondii pathologic  
Graimondii PWY-7226 Gossypium raimondii pathologic  
Graimondii PWY-7227 Gossypium raimondii pathologic  
Graimondii PWY-7228 Gossypium raimondii pathologic  
Graimondii PWY-7229 Gossypium raimondii pathologic  
Graimondii PWY-841 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G048900 0.5kb upstream 0.5kb upstream 5831 true Chr03: 6816674-6822504 Gossypium raimondii
Gorai.003G048900 0.5kb upstream 0.5kb upstream 500 false Chr03: 6822005-6822504 Gossypium raimondii
Gorai.003G048900 0.5kb downstream 0.5kb downstream 5831 true Chr03: 6816174-6822004 Gossypium raimondii
Gorai.003G048900 0.5kb downstream 0.5kb downstream 500 false Chr03: 6816174-6816673 Gossypium raimondii
Gorai.003G048900 1.0kb upstream 1.0kb upstream 6331 true Chr03: 6816674-6823004 Gossypium raimondii
Gorai.003G048900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6822005-6823004 Gossypium raimondii
Gorai.003G048900 1.0kb downstream 1.0kb downstream 6331 true Chr03: 6815674-6822004 Gossypium raimondii
Gorai.003G048900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6815674-6816673 Gossypium raimondii
Gorai.003G048900 2.0kb upstream 2.0kb upstream 7331 true Chr03: 6816674-6824004 Gossypium raimondii
Gorai.003G048900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6822005-6824004 Gossypium raimondii
Gorai.003G048900 2.0kb downstream 2.0kb downstream 7331 true Chr03: 6814674-6822004 Gossypium raimondii
Gorai.003G048900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6814674-6816673 Gossypium raimondii
Gorai.003G048900 5.0kb upstream 5.0kb upstream 10331 true Chr03: 6816674-6827004 Gossypium raimondii
Gorai.003G048900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6822005-6827004 Gossypium raimondii
Gorai.003G048900 5.0kb downstream 5.0kb downstream 10331 true Chr03: 6811674-6822004 Gossypium raimondii
Gorai.003G048900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6811674-6816673 Gossypium raimondii
Gorai.003G048900 10.0kb upstream 10.0kb upstream 15331 true Chr03: 6816674-6832004 Gossypium raimondii
Gorai.003G048900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6822005-6832004 Gossypium raimondii
Gorai.003G048900 10.0kb downstream 10.0kb downstream 15331 true Chr03: 6806674-6822004 Gossypium raimondii
Gorai.003G048900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6806674-6816673 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121513558 5273 Angiosperm Singleton cluster - no MSA
123805705 5264 Brassicales-Malvales Singleton cluster - no MSA
124302662 5266 SBM Singleton cluster - no MSA
124153457 5268 Malvidae Singleton cluster - no MSA
123878572 5270 Rosid Singleton cluster - no MSA
123461957 5271 Pentapetalae Singleton cluster - no MSA
122497302 5272 Eudicot Singleton cluster - no MSA
120786538 5274 Embryophyte Singleton cluster - no MSA
122828360 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain