Gene : Gorai.003G072900 G. raimondii v2.1
Defline:  (1 of 4) PTHR23198:SF4 - NUCLEOPORIN AUTOPEPTIDASE Genomic Order:  729
Name:  ? Gorai.003G072900 Secondary Identifier:  ? PAC:26798202
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G072900 0.5kb upstream 0.5kb upstream 9599 true Chr03: 17298855-17308453 Gossypium raimondii
Gorai.003G072900 0.5kb upstream 0.5kb upstream 500 false Chr03: 17307954-17308453 Gossypium raimondii
Gorai.003G072900 0.5kb downstream 0.5kb downstream 9599 true Chr03: 17298355-17307953 Gossypium raimondii
Gorai.003G072900 0.5kb downstream 0.5kb downstream 500 false Chr03: 17298355-17298854 Gossypium raimondii
Gorai.003G072900 1.0kb upstream 1.0kb upstream 10099 true Chr03: 17298855-17308953 Gossypium raimondii
Gorai.003G072900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 17307954-17308953 Gossypium raimondii
Gorai.003G072900 1.0kb downstream 1.0kb downstream 10099 true Chr03: 17297855-17307953 Gossypium raimondii
Gorai.003G072900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 17297855-17298854 Gossypium raimondii
Gorai.003G072900 2.0kb upstream 2.0kb upstream 11099 true Chr03: 17298855-17309953 Gossypium raimondii
Gorai.003G072900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 17307954-17309953 Gossypium raimondii
Gorai.003G072900 2.0kb downstream 2.0kb downstream 11099 true Chr03: 17296855-17307953 Gossypium raimondii
Gorai.003G072900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 17296855-17298854 Gossypium raimondii
Gorai.003G072900 5.0kb upstream 5.0kb upstream 14099 true Chr03: 17298855-17312953 Gossypium raimondii
Gorai.003G072900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 17307954-17312953 Gossypium raimondii
Gorai.003G072900 5.0kb downstream 5.0kb downstream 14099 true Chr03: 17293855-17307953 Gossypium raimondii
Gorai.003G072900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 17293855-17298854 Gossypium raimondii
Gorai.003G072900 10.0kb upstream 10.0kb upstream 19099 true Chr03: 17298855-17317953 Gossypium raimondii
Gorai.003G072900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 17307954-17317953 Gossypium raimondii
Gorai.003G072900 10.0kb downstream 10.0kb downstream 19099 true Chr03: 17288855-17307953 Gossypium raimondii
Gorai.003G072900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 17288855-17298854 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831227 5264 Brassicales-Malvales View MSA
124341872 5266 SBM View MSA
124253768 5268 Malvidae View MSA
124061864 5270 Rosid View MSA
123748776 5271 Pentapetalae View MSA
122797875 5272 Eudicot View MSA
122041710 5273 Angiosperm View MSA
121349617 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain