Gene : Gorai.003G078500 G. raimondii v2.1
Defline:  (1 of 2) PTHR12953 - MEMBRANE PROTEIN CH1 RELATED Genomic Order:  785
Name:  ? Gorai.003G078500 Secondary Identifier:  ? PAC:26801028
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G078500 0.5kb upstream 0.5kb upstream 3103 true Chr03: 19268105-19271207 Gossypium raimondii
Gorai.003G078500 0.5kb upstream 0.5kb upstream 500 false Chr03: 19270708-19271207 Gossypium raimondii
Gorai.003G078500 0.5kb downstream 0.5kb downstream 3103 true Chr03: 19267605-19270707 Gossypium raimondii
Gorai.003G078500 0.5kb downstream 0.5kb downstream 500 false Chr03: 19267605-19268104 Gossypium raimondii
Gorai.003G078500 1.0kb upstream 1.0kb upstream 3603 true Chr03: 19268105-19271707 Gossypium raimondii
Gorai.003G078500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 19270708-19271707 Gossypium raimondii
Gorai.003G078500 1.0kb downstream 1.0kb downstream 3603 true Chr03: 19267105-19270707 Gossypium raimondii
Gorai.003G078500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 19267105-19268104 Gossypium raimondii
Gorai.003G078500 2.0kb upstream 2.0kb upstream 4603 true Chr03: 19268105-19272707 Gossypium raimondii
Gorai.003G078500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 19270708-19272707 Gossypium raimondii
Gorai.003G078500 2.0kb downstream 2.0kb downstream 4603 true Chr03: 19266105-19270707 Gossypium raimondii
Gorai.003G078500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 19266105-19268104 Gossypium raimondii
Gorai.003G078500 5.0kb upstream 5.0kb upstream 7603 true Chr03: 19268105-19275707 Gossypium raimondii
Gorai.003G078500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 19270708-19275707 Gossypium raimondii
Gorai.003G078500 5.0kb downstream 5.0kb downstream 7603 true Chr03: 19263105-19270707 Gossypium raimondii
Gorai.003G078500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 19263105-19268104 Gossypium raimondii
Gorai.003G078500 10.0kb upstream 10.0kb upstream 12603 true Chr03: 19268105-19280707 Gossypium raimondii
Gorai.003G078500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 19270708-19280707 Gossypium raimondii
Gorai.003G078500 10.0kb downstream 10.0kb downstream 12603 true Chr03: 19258105-19270707 Gossypium raimondii
Gorai.003G078500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 19258105-19268104 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828986 5264 Brassicales-Malvales View MSA
124321568 5266 SBM View MSA
124241982 5268 Malvidae View MSA
124066197 5270 Rosid View MSA
123744151 5271 Pentapetalae View MSA
122792013 5272 Eudicot View MSA
122048121 5273 Angiosperm View MSA
121348986 5274 Embryophyte View MSA
123381113 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain