Gene : Gorai.003G085900 G. raimondii v2.1
Defline:  (1 of 4) PTHR11751:SF380 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 2-RELATED Genomic Order:  859
Name:  ? Gorai.003G085900 Secondary Identifier:  ? PAC:26797255
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii ETHYL-PWY Gossypium raimondii pathologic  
Graimondii PWY-7270 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G085900 0.5kb upstream 0.5kb upstream 3584 true Chr03: 21720217-21723800 Gossypium raimondii
Gorai.003G085900 0.5kb upstream 0.5kb upstream 500 false Chr03: 21720217-21720716 Gossypium raimondii
Gorai.003G085900 0.5kb downstream 0.5kb downstream 3584 true Chr03: 21720717-21724300 Gossypium raimondii
Gorai.003G085900 0.5kb downstream 0.5kb downstream 500 false Chr03: 21723801-21724300 Gossypium raimondii
Gorai.003G085900 1.0kb upstream 1.0kb upstream 4084 true Chr03: 21719717-21723800 Gossypium raimondii
Gorai.003G085900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 21719717-21720716 Gossypium raimondii
Gorai.003G085900 1.0kb downstream 1.0kb downstream 4084 true Chr03: 21720717-21724800 Gossypium raimondii
Gorai.003G085900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 21723801-21724800 Gossypium raimondii
Gorai.003G085900 2.0kb upstream 2.0kb upstream 5084 true Chr03: 21718717-21723800 Gossypium raimondii
Gorai.003G085900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 21718717-21720716 Gossypium raimondii
Gorai.003G085900 2.0kb downstream 2.0kb downstream 5084 true Chr03: 21720717-21725800 Gossypium raimondii
Gorai.003G085900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 21723801-21725800 Gossypium raimondii
Gorai.003G085900 5.0kb upstream 5.0kb upstream 8084 true Chr03: 21715717-21723800 Gossypium raimondii
Gorai.003G085900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 21715717-21720716 Gossypium raimondii
Gorai.003G085900 5.0kb downstream 5.0kb downstream 8084 true Chr03: 21720717-21728800 Gossypium raimondii
Gorai.003G085900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 21723801-21728800 Gossypium raimondii
Gorai.003G085900 10.0kb upstream 10.0kb upstream 13084 true Chr03: 21710717-21723800 Gossypium raimondii
Gorai.003G085900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 21710717-21720716 Gossypium raimondii
Gorai.003G085900 10.0kb downstream 10.0kb downstream 13084 true Chr03: 21720717-21733800 Gossypium raimondii
Gorai.003G085900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 21723801-21733800 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832800 5264 Brassicales-Malvales View MSA
124351363 5266 SBM View MSA
124243868 5268 Malvidae View MSA
124064739 5270 Rosid View MSA
123742797 5271 Pentapetalae View MSA
122787155 5272 Eudicot View MSA
122050094 5273 Angiosperm View MSA
121311735 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain