Gene : Gorai.003G093400 G. raimondii v2.1
Defline:  (1 of 2) PTHR13871:SF43 - CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN Genomic Order:  934
Name:  ? Gorai.003G093400 Secondary Identifier:  ? PAC:26800112
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7039 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G093400 0.5kb upstream 0.5kb upstream 3846 true Chr03: 29184200-29188045 Gossypium raimondii
Gorai.003G093400 0.5kb upstream 0.5kb upstream 500 false Chr03: 29184200-29184699 Gossypium raimondii
Gorai.003G093400 0.5kb downstream 0.5kb downstream 3846 true Chr03: 29184700-29188545 Gossypium raimondii
Gorai.003G093400 0.5kb downstream 0.5kb downstream 500 false Chr03: 29188046-29188545 Gossypium raimondii
Gorai.003G093400 1.0kb upstream 1.0kb upstream 4346 true Chr03: 29183700-29188045 Gossypium raimondii
Gorai.003G093400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 29183700-29184699 Gossypium raimondii
Gorai.003G093400 1.0kb downstream 1.0kb downstream 4346 true Chr03: 29184700-29189045 Gossypium raimondii
Gorai.003G093400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 29188046-29189045 Gossypium raimondii
Gorai.003G093400 2.0kb upstream 2.0kb upstream 5346 true Chr03: 29182700-29188045 Gossypium raimondii
Gorai.003G093400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 29182700-29184699 Gossypium raimondii
Gorai.003G093400 2.0kb downstream 2.0kb downstream 5346 true Chr03: 29184700-29190045 Gossypium raimondii
Gorai.003G093400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 29188046-29190045 Gossypium raimondii
Gorai.003G093400 5.0kb upstream 5.0kb upstream 8346 true Chr03: 29179700-29188045 Gossypium raimondii
Gorai.003G093400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 29179700-29184699 Gossypium raimondii
Gorai.003G093400 5.0kb downstream 5.0kb downstream 8346 true Chr03: 29184700-29193045 Gossypium raimondii
Gorai.003G093400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 29188046-29193045 Gossypium raimondii
Gorai.003G093400 10.0kb upstream 10.0kb upstream 13346 true Chr03: 29174700-29188045 Gossypium raimondii
Gorai.003G093400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 29174700-29184699 Gossypium raimondii
Gorai.003G093400 10.0kb downstream 10.0kb downstream 13346 true Chr03: 29184700-29198045 Gossypium raimondii
Gorai.003G093400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 29188046-29198045 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840186 5264 Brassicales-Malvales View MSA
124340169 5266 SBM View MSA
124239800 5268 Malvidae View MSA
124061388 5270 Rosid View MSA
123737887 5271 Pentapetalae View MSA
122796546 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain