Gene : Gorai.003G129300 G. raimondii v2.1
Defline:  (1 of 6) PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN Genomic Order:  1293
Name:  ? Gorai.003G129300 Secondary Identifier:  ? PAC:26797212
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G129300 0.5kb upstream 0.5kb upstream 2584 true Chr03: 38196000-38198583 Gossypium raimondii
Gorai.003G129300 0.5kb upstream 0.5kb upstream 500 false Chr03: 38196000-38196499 Gossypium raimondii
Gorai.003G129300 0.5kb downstream 0.5kb downstream 2584 true Chr03: 38196500-38199083 Gossypium raimondii
Gorai.003G129300 0.5kb downstream 0.5kb downstream 500 false Chr03: 38198584-38199083 Gossypium raimondii
Gorai.003G129300 1.0kb upstream 1.0kb upstream 3084 true Chr03: 38195500-38198583 Gossypium raimondii
Gorai.003G129300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38195500-38196499 Gossypium raimondii
Gorai.003G129300 1.0kb downstream 1.0kb downstream 3084 true Chr03: 38196500-38199583 Gossypium raimondii
Gorai.003G129300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38198584-38199583 Gossypium raimondii
Gorai.003G129300 2.0kb upstream 2.0kb upstream 4084 true Chr03: 38194500-38198583 Gossypium raimondii
Gorai.003G129300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38194500-38196499 Gossypium raimondii
Gorai.003G129300 2.0kb downstream 2.0kb downstream 4084 true Chr03: 38196500-38200583 Gossypium raimondii
Gorai.003G129300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38198584-38200583 Gossypium raimondii
Gorai.003G129300 5.0kb upstream 5.0kb upstream 7084 true Chr03: 38191500-38198583 Gossypium raimondii
Gorai.003G129300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38191500-38196499 Gossypium raimondii
Gorai.003G129300 5.0kb downstream 5.0kb downstream 7084 true Chr03: 38196500-38203583 Gossypium raimondii
Gorai.003G129300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38198584-38203583 Gossypium raimondii
Gorai.003G129300 10.0kb upstream 10.0kb upstream 12084 true Chr03: 38186500-38198583 Gossypium raimondii
Gorai.003G129300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38186500-38196499 Gossypium raimondii
Gorai.003G129300 10.0kb downstream 10.0kb downstream 12084 true Chr03: 38196500-38208583 Gossypium raimondii
Gorai.003G129300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38198584-38208583 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838117 5264 Brassicales-Malvales View MSA
124341456 5266 SBM View MSA
124249586 5268 Malvidae View MSA
124073026 5270 Rosid View MSA
123745848 5271 Pentapetalae View MSA
122795555 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain