Gene : Gorai.003G131800 G. raimondii v2.1
Defline:  (1 of 3) PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1318
Name:  ? Gorai.003G131800 Secondary Identifier:  ? PAC:26800137
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G131800 0.5kb upstream 0.5kb upstream 2995 true Chr03: 38662673-38665667 Gossypium raimondii
Gorai.003G131800 0.5kb upstream 0.5kb upstream 500 false Chr03: 38665168-38665667 Gossypium raimondii
Gorai.003G131800 0.5kb downstream 0.5kb downstream 2995 true Chr03: 38662173-38665167 Gossypium raimondii
Gorai.003G131800 0.5kb downstream 0.5kb downstream 500 false Chr03: 38662173-38662672 Gossypium raimondii
Gorai.003G131800 1.0kb upstream 1.0kb upstream 3495 true Chr03: 38662673-38666167 Gossypium raimondii
Gorai.003G131800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38665168-38666167 Gossypium raimondii
Gorai.003G131800 1.0kb downstream 1.0kb downstream 3495 true Chr03: 38661673-38665167 Gossypium raimondii
Gorai.003G131800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38661673-38662672 Gossypium raimondii
Gorai.003G131800 2.0kb upstream 2.0kb upstream 4495 true Chr03: 38662673-38667167 Gossypium raimondii
Gorai.003G131800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38665168-38667167 Gossypium raimondii
Gorai.003G131800 2.0kb downstream 2.0kb downstream 4495 true Chr03: 38660673-38665167 Gossypium raimondii
Gorai.003G131800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38660673-38662672 Gossypium raimondii
Gorai.003G131800 5.0kb upstream 5.0kb upstream 7495 true Chr03: 38662673-38670167 Gossypium raimondii
Gorai.003G131800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38665168-38670167 Gossypium raimondii
Gorai.003G131800 5.0kb downstream 5.0kb downstream 7495 true Chr03: 38657673-38665167 Gossypium raimondii
Gorai.003G131800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38657673-38662672 Gossypium raimondii
Gorai.003G131800 10.0kb upstream 10.0kb upstream 12495 true Chr03: 38662673-38675167 Gossypium raimondii
Gorai.003G131800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38665168-38675167 Gossypium raimondii
Gorai.003G131800 10.0kb downstream 10.0kb downstream 12495 true Chr03: 38652673-38665167 Gossypium raimondii
Gorai.003G131800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38652673-38662672 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841705 5264 Brassicales-Malvales View MSA
124337529 5266 SBM View MSA
124244878 5268 Malvidae View MSA
124063635 5270 Rosid View MSA
123750862 5271 Pentapetalae View MSA
122792992 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain