Gene : Gorai.003G138500 G. raimondii v2.1
Defline:  (1 of 1) PTHR11177//PTHR11177:SF190 - CHITINASE Genomic Order:  1385
Name:  ? Gorai.003G138500 Secondary Identifier:  ? PAC:26797836
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6902 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G138500 0.5kb upstream 0.5kb upstream 4881 true Chr03: 39992408-39997288 Gossypium raimondii
Gorai.003G138500 0.5kb upstream 0.5kb upstream 500 false Chr03: 39996789-39997288 Gossypium raimondii
Gorai.003G138500 0.5kb downstream 0.5kb downstream 4881 true Chr03: 39991908-39996788 Gossypium raimondii
Gorai.003G138500 0.5kb downstream 0.5kb downstream 500 false Chr03: 39991908-39992407 Gossypium raimondii
Gorai.003G138500 1.0kb upstream 1.0kb upstream 5381 true Chr03: 39992408-39997788 Gossypium raimondii
Gorai.003G138500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39996789-39997788 Gossypium raimondii
Gorai.003G138500 1.0kb downstream 1.0kb downstream 5381 true Chr03: 39991408-39996788 Gossypium raimondii
Gorai.003G138500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39991408-39992407 Gossypium raimondii
Gorai.003G138500 2.0kb upstream 2.0kb upstream 6381 true Chr03: 39992408-39998788 Gossypium raimondii
Gorai.003G138500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39996789-39998788 Gossypium raimondii
Gorai.003G138500 2.0kb downstream 2.0kb downstream 6381 true Chr03: 39990408-39996788 Gossypium raimondii
Gorai.003G138500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39990408-39992407 Gossypium raimondii
Gorai.003G138500 5.0kb upstream 5.0kb upstream 9381 true Chr03: 39992408-40001788 Gossypium raimondii
Gorai.003G138500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39996789-40001788 Gossypium raimondii
Gorai.003G138500 5.0kb downstream 5.0kb downstream 9381 true Chr03: 39987408-39996788 Gossypium raimondii
Gorai.003G138500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39987408-39992407 Gossypium raimondii
Gorai.003G138500 10.0kb upstream 10.0kb upstream 14381 true Chr03: 39992408-40006788 Gossypium raimondii
Gorai.003G138500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39996789-40006788 Gossypium raimondii
Gorai.003G138500 10.0kb downstream 10.0kb downstream 14381 true Chr03: 39982408-39996788 Gossypium raimondii
Gorai.003G138500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39982408-39992407 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780494 5273 Angiosperm View MSA
123805541 5264 Brassicales-Malvales Singleton cluster - no MSA
124302510 5266 SBM Singleton cluster - no MSA
124253967 5268 Malvidae View MSA
124072942 5270 Rosid View MSA
123746494 5271 Pentapetalae View MSA
122771936 5272 Eudicot View MSA
121052105 5274 Embryophyte View MSA
123092162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain