Gene : Gorai.003G136500 G. raimondii v2.1
Defline:  (1 of 2) PTHR11035 - PTPLA DOMAIN PROTEIN Genomic Order:  1365
Name:  ? Gorai.003G136500 Secondary Identifier:  ? PAC:26800402
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5080 Gossypium raimondii pathologic  
Graimondii PWY-6433 Gossypium raimondii pathologic  
Graimondii PWY-6598 Gossypium raimondii pathologic  
Graimondii PWY-7036 Gossypium raimondii pathologic  
Graimondii PWY-7601 Gossypium raimondii pathologic  
Graimondii PWY-7606 Gossypium raimondii pathologic  
Graimondii PWY-7619 Gossypium raimondii pathologic  
Graimondii PWY-7726 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G136500 0.5kb upstream 0.5kb upstream 3865 true Chr03: 39554520-39558384 Gossypium raimondii
Gorai.003G136500 0.5kb upstream 0.5kb upstream 500 false Chr03: 39554520-39555019 Gossypium raimondii
Gorai.003G136500 0.5kb downstream 0.5kb downstream 3865 true Chr03: 39555020-39558884 Gossypium raimondii
Gorai.003G136500 0.5kb downstream 0.5kb downstream 500 false Chr03: 39558385-39558884 Gossypium raimondii
Gorai.003G136500 1.0kb upstream 1.0kb upstream 4365 true Chr03: 39554020-39558384 Gossypium raimondii
Gorai.003G136500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39554020-39555019 Gossypium raimondii
Gorai.003G136500 1.0kb downstream 1.0kb downstream 4365 true Chr03: 39555020-39559384 Gossypium raimondii
Gorai.003G136500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39558385-39559384 Gossypium raimondii
Gorai.003G136500 2.0kb upstream 2.0kb upstream 5365 true Chr03: 39553020-39558384 Gossypium raimondii
Gorai.003G136500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39553020-39555019 Gossypium raimondii
Gorai.003G136500 2.0kb downstream 2.0kb downstream 5365 true Chr03: 39555020-39560384 Gossypium raimondii
Gorai.003G136500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39558385-39560384 Gossypium raimondii
Gorai.003G136500 5.0kb upstream 5.0kb upstream 8365 true Chr03: 39550020-39558384 Gossypium raimondii
Gorai.003G136500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39550020-39555019 Gossypium raimondii
Gorai.003G136500 5.0kb downstream 5.0kb downstream 8365 true Chr03: 39555020-39563384 Gossypium raimondii
Gorai.003G136500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39558385-39563384 Gossypium raimondii
Gorai.003G136500 10.0kb upstream 10.0kb upstream 13365 true Chr03: 39545020-39558384 Gossypium raimondii
Gorai.003G136500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39545020-39555019 Gossypium raimondii
Gorai.003G136500 10.0kb downstream 10.0kb downstream 13365 true Chr03: 39555020-39568384 Gossypium raimondii
Gorai.003G136500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39558385-39568384 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836753 5264 Brassicales-Malvales View MSA
124349665 5266 SBM View MSA
124243174 5268 Malvidae View MSA
124067090 5270 Rosid View MSA
123747996 5271 Pentapetalae View MSA
122792245 5272 Eudicot View MSA
122043901 5273 Angiosperm View MSA
121347400 5274 Embryophyte View MSA
123425989 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain