Gene : Gorai.003G147900 G. raimondii v2.1
Defline:  (1 of 3) PTHR23083//PTHR23083:SF408 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR Genomic Order:  1479
Name:  ? Gorai.003G147900 Secondary Identifier:  ? PAC:26800886
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G147900 0.5kb upstream 0.5kb upstream 4664 true Chr03: 41543769-41548432 Gossypium raimondii
Gorai.003G147900 0.5kb upstream 0.5kb upstream 500 false Chr03: 41543769-41544268 Gossypium raimondii
Gorai.003G147900 0.5kb downstream 0.5kb downstream 4664 true Chr03: 41544269-41548932 Gossypium raimondii
Gorai.003G147900 0.5kb downstream 0.5kb downstream 500 false Chr03: 41548433-41548932 Gossypium raimondii
Gorai.003G147900 1.0kb upstream 1.0kb upstream 5164 true Chr03: 41543269-41548432 Gossypium raimondii
Gorai.003G147900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41543269-41544268 Gossypium raimondii
Gorai.003G147900 1.0kb downstream 1.0kb downstream 5164 true Chr03: 41544269-41549432 Gossypium raimondii
Gorai.003G147900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41548433-41549432 Gossypium raimondii
Gorai.003G147900 2.0kb upstream 2.0kb upstream 6164 true Chr03: 41542269-41548432 Gossypium raimondii
Gorai.003G147900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41542269-41544268 Gossypium raimondii
Gorai.003G147900 2.0kb downstream 2.0kb downstream 6164 true Chr03: 41544269-41550432 Gossypium raimondii
Gorai.003G147900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41548433-41550432 Gossypium raimondii
Gorai.003G147900 5.0kb upstream 5.0kb upstream 9164 true Chr03: 41539269-41548432 Gossypium raimondii
Gorai.003G147900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41539269-41544268 Gossypium raimondii
Gorai.003G147900 5.0kb downstream 5.0kb downstream 9164 true Chr03: 41544269-41553432 Gossypium raimondii
Gorai.003G147900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41548433-41553432 Gossypium raimondii
Gorai.003G147900 10.0kb upstream 10.0kb upstream 14164 true Chr03: 41534269-41548432 Gossypium raimondii
Gorai.003G147900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41534269-41544268 Gossypium raimondii
Gorai.003G147900 10.0kb downstream 10.0kb downstream 14164 true Chr03: 41544269-41558432 Gossypium raimondii
Gorai.003G147900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41548433-41558432 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824028 5264 Brassicales-Malvales View MSA
124347277 5266 SBM View MSA
124245412 5268 Malvidae View MSA
124070940 5270 Rosid View MSA
123743745 5271 Pentapetalae View MSA
122791061 5272 Eudicot View MSA
122041529 5273 Angiosperm View MSA
121349439 5274 Embryophyte View MSA
123381312 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain