Gene : Gorai.003G151400 G. raimondii v2.1
Defline:  (1 of 1) PTHR11142:SF9 - TRNA PSEUDOURIDINE SYNTHASE Genomic Order:  1514
Name:  ? Gorai.003G151400 Secondary Identifier:  ? PAC:26798872
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G151400 0.5kb upstream 0.5kb upstream 3917 true Chr03: 41893275-41897191 Gossypium raimondii
Gorai.003G151400 0.5kb upstream 0.5kb upstream 500 false Chr03: 41896692-41897191 Gossypium raimondii
Gorai.003G151400 0.5kb downstream 0.5kb downstream 3917 true Chr03: 41892775-41896691 Gossypium raimondii
Gorai.003G151400 0.5kb downstream 0.5kb downstream 500 false Chr03: 41892775-41893274 Gossypium raimondii
Gorai.003G151400 1.0kb upstream 1.0kb upstream 4417 true Chr03: 41893275-41897691 Gossypium raimondii
Gorai.003G151400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41896692-41897691 Gossypium raimondii
Gorai.003G151400 1.0kb downstream 1.0kb downstream 4417 true Chr03: 41892275-41896691 Gossypium raimondii
Gorai.003G151400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41892275-41893274 Gossypium raimondii
Gorai.003G151400 2.0kb upstream 2.0kb upstream 5417 true Chr03: 41893275-41898691 Gossypium raimondii
Gorai.003G151400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41896692-41898691 Gossypium raimondii
Gorai.003G151400 2.0kb downstream 2.0kb downstream 5417 true Chr03: 41891275-41896691 Gossypium raimondii
Gorai.003G151400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41891275-41893274 Gossypium raimondii
Gorai.003G151400 5.0kb upstream 5.0kb upstream 8417 true Chr03: 41893275-41901691 Gossypium raimondii
Gorai.003G151400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41896692-41901691 Gossypium raimondii
Gorai.003G151400 5.0kb downstream 5.0kb downstream 8417 true Chr03: 41888275-41896691 Gossypium raimondii
Gorai.003G151400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41888275-41893274 Gossypium raimondii
Gorai.003G151400 10.0kb upstream 10.0kb upstream 13417 true Chr03: 41893275-41906691 Gossypium raimondii
Gorai.003G151400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41896692-41906691 Gossypium raimondii
Gorai.003G151400 10.0kb downstream 10.0kb downstream 13417 true Chr03: 41883275-41896691 Gossypium raimondii
Gorai.003G151400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41883275-41893274 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827681 5264 Brassicales-Malvales View MSA
124345381 5266 SBM View MSA
124243615 5268 Malvidae View MSA
124062436 5270 Rosid View MSA
123743490 5271 Pentapetalae View MSA
122793573 5272 Eudicot View MSA
122043730 5273 Angiosperm View MSA
121347551 5274 Embryophyte View MSA
123427150 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain