Gene : Gorai.003G162800 G. raimondii v2.1
Defline:  (1 of 2) PTHR23138:SF97 - NUCLEAR PORE COMPLEX PROTEIN NUP50 Genomic Order:  1628
Name:  ? Gorai.003G162800 Secondary Identifier:  ? PAC:26797551
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G162800 0.5kb upstream 0.5kb upstream 5299 true Chr03: 43210313-43215611 Gossypium raimondii
Gorai.003G162800 0.5kb upstream 0.5kb upstream 500 false Chr03: 43210313-43210812 Gossypium raimondii
Gorai.003G162800 0.5kb downstream 0.5kb downstream 5299 true Chr03: 43210813-43216111 Gossypium raimondii
Gorai.003G162800 0.5kb downstream 0.5kb downstream 500 false Chr03: 43215612-43216111 Gossypium raimondii
Gorai.003G162800 1.0kb upstream 1.0kb upstream 5799 true Chr03: 43209813-43215611 Gossypium raimondii
Gorai.003G162800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43209813-43210812 Gossypium raimondii
Gorai.003G162800 1.0kb downstream 1.0kb downstream 5799 true Chr03: 43210813-43216611 Gossypium raimondii
Gorai.003G162800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43215612-43216611 Gossypium raimondii
Gorai.003G162800 2.0kb upstream 2.0kb upstream 6799 true Chr03: 43208813-43215611 Gossypium raimondii
Gorai.003G162800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43208813-43210812 Gossypium raimondii
Gorai.003G162800 2.0kb downstream 2.0kb downstream 6799 true Chr03: 43210813-43217611 Gossypium raimondii
Gorai.003G162800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43215612-43217611 Gossypium raimondii
Gorai.003G162800 5.0kb upstream 5.0kb upstream 9799 true Chr03: 43205813-43215611 Gossypium raimondii
Gorai.003G162800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43205813-43210812 Gossypium raimondii
Gorai.003G162800 5.0kb downstream 5.0kb downstream 9799 true Chr03: 43210813-43220611 Gossypium raimondii
Gorai.003G162800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43215612-43220611 Gossypium raimondii
Gorai.003G162800 10.0kb upstream 10.0kb upstream 14799 true Chr03: 43200813-43215611 Gossypium raimondii
Gorai.003G162800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43200813-43210812 Gossypium raimondii
Gorai.003G162800 10.0kb downstream 10.0kb downstream 14799 true Chr03: 43210813-43225611 Gossypium raimondii
Gorai.003G162800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43215612-43225611 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829340 5264 Brassicales-Malvales View MSA
124338710 5266 SBM View MSA
124240923 5268 Malvidae View MSA
124070591 5270 Rosid View MSA
123739047 5271 Pentapetalae View MSA
122795467 5272 Eudicot View MSA
122048629 5273 Angiosperm View MSA
121344794 5274 Embryophyte View MSA
123425860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain