Gene : Gorai.004G006200 G. raimondii v2.1
Defline:  (1 of 2) PF00575//PF03876 - S1 RNA binding domain (S1) // SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 (SHS2_Rpb7-N) Genomic Order:  62
Name:  ? Gorai.004G006200 Secondary Identifier:  ? PAC:26772205
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G006200 0.5kb upstream 0.5kb upstream 3928 true Chr04: 367796-371723 Gossypium raimondii
Gorai.004G006200 0.5kb upstream 0.5kb upstream 500 false Chr04: 371224-371723 Gossypium raimondii
Gorai.004G006200 0.5kb downstream 0.5kb downstream 3928 true Chr04: 367296-371223 Gossypium raimondii
Gorai.004G006200 0.5kb downstream 0.5kb downstream 500 false Chr04: 367296-367795 Gossypium raimondii
Gorai.004G006200 1.0kb upstream 1.0kb upstream 4428 true Chr04: 367796-372223 Gossypium raimondii
Gorai.004G006200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 371224-372223 Gossypium raimondii
Gorai.004G006200 1.0kb downstream 1.0kb downstream 4428 true Chr04: 366796-371223 Gossypium raimondii
Gorai.004G006200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 366796-367795 Gossypium raimondii
Gorai.004G006200 2.0kb upstream 2.0kb upstream 5428 true Chr04: 367796-373223 Gossypium raimondii
Gorai.004G006200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 371224-373223 Gossypium raimondii
Gorai.004G006200 2.0kb downstream 2.0kb downstream 5428 true Chr04: 365796-371223 Gossypium raimondii
Gorai.004G006200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 365796-367795 Gossypium raimondii
Gorai.004G006200 5.0kb upstream 5.0kb upstream 8428 true Chr04: 367796-376223 Gossypium raimondii
Gorai.004G006200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 371224-376223 Gossypium raimondii
Gorai.004G006200 5.0kb downstream 5.0kb downstream 8428 true Chr04: 362796-371223 Gossypium raimondii
Gorai.004G006200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 362796-367795 Gossypium raimondii
Gorai.004G006200 10.0kb upstream 10.0kb upstream 13428 true Chr04: 367796-381223 Gossypium raimondii
Gorai.004G006200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 371224-381223 Gossypium raimondii
Gorai.004G006200 10.0kb downstream 10.0kb downstream 13428 true Chr04: 357796-371223 Gossypium raimondii
Gorai.004G006200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 357796-367795 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829560 5264 Brassicales-Malvales View MSA
124341340 5266 SBM View MSA
124239705 5268 Malvidae View MSA
124066331 5270 Rosid View MSA
123736511 5271 Pentapetalae View MSA
122789999 5272 Eudicot View MSA
122045109 5273 Angiosperm View MSA
121343808 5274 Embryophyte View MSA
123424516 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain